Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SOX11P35716 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SOX11P35716 AC002056.1-201ENST00000395613 760 ntBASIC15.68■□□□□ 0.1
SOX11P35716 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SOX11P35716 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.68■□□□□ 0.1
SOX11P35716 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SOX11P35716 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.68■□□□□ 0.1
SOX11P35716 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.68■□□□□ 0.1
SOX11P35716 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SOX11P35716 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.68■□□□□ 0.1
SOX11P35716 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.68■□□□□ 0.1
SOX11P35716 RFPL4AP1-201ENST00000530883 850 ntBASIC15.68■□□□□ 0.1
SOX11P35716 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.68■□□□□ 0.1
SOX11P35716 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
SOX11P35716 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.68■□□□□ 0.1
SOX11P35716 AC105339.1-204ENST00000636249 355 ntBASIC15.68■□□□□ 0.1
SOX11P35716 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SOX11P35716 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
SOX11P35716 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.68■□□□□ 0.1
SOX11P35716 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SOX11P35716 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SOX11P35716 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SOX11P35716 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SOX11P35716 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SOX11P35716 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
SOX11P35716 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.68■□□□□ 0.1
SOX11P35716 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
SOX11P35716 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SOX11P35716 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SOX11P35716 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SOX11P35716 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SOX11P35716 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SOX11P35716 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SOX11P35716 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SOX11P35716 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SOX11P35716 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.67■□□□□ 0.1
SOX11P35716 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SOX11P35716 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.67■□□□□ 0.1
SOX11P35716 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SOX11P35716 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.67■□□□□ 0.1
SOX11P35716 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SOX11P35716 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SOX11P35716 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
SOX11P35716 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SOX11P35716 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SOX11P35716 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SOX11P35716 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.67■□□□□ 0.1
SOX11P35716 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.67■□□□□ 0.1
SOX11P35716 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SOX11P35716 AC140658.5-201ENST00000438532 169 ntBASIC15.67■□□□□ 0.1
SOX11P35716 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.67■□□□□ 0.1
SOX11P35716 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.67■□□□□ 0.1
SOX11P35716 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.67■□□□□ 0.1
SOX11P35716 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.67■□□□□ 0.1
SOX11P35716 MPDU1-223ENST00000582151 728 ntBASIC15.67■□□□□ 0.1
SOX11P35716 AC004835.2-201ENST00000603762 682 ntBASIC15.67■□□□□ 0.1
SOX11P35716 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.67■□□□□ 0.1
SOX11P35716 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC15.67■□□□□ 0.1
SOX11P35716 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SOX11P35716 CDC14C-201ENST00000428251 1719 ntBASIC15.67■□□□□ 0.1
SOX11P35716 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SOX11P35716 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.67■□□□□ 0.1
SOX11P35716 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.67■□□□□ 0.1
SOX11P35716 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SOX11P35716 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SOX11P35716 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SOX11P35716 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SOX11P35716 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
SOX11P35716 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SOX11P35716 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SOX11P35716 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SOX11P35716 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.67■□□□□ 0.1
SOX11P35716 KRT8P39-201ENST00000396270 1433 ntBASIC15.67■□□□□ 0.1
SOX11P35716 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
SOX11P35716 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SOX11P35716 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SOX11P35716 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.67■□□□□ 0.1
SOX11P35716 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SOX11P35716 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.67■□□□□ 0.1
SOX11P35716 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SOX11P35716 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SOX11P35716 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SOX11P35716 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SOX11P35716 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SOX11P35716 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SOX11P35716 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SOX11P35716 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SOX11P35716 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.66■□□□□ 0.1
SOX11P35716 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SOX11P35716 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
SOX11P35716 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SOX11P35716 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SOX11P35716 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.66■□□□□ 0.1
SOX11P35716 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
SOX11P35716 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
SOX11P35716 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SOX11P35716 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SOX11P35716 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
SOX11P35716 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
SOX11P35716 AC004461.1-201ENST00000412461 403 ntBASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms