Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SHC1P29353 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SHC1P29353 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.65□□□□□ -0.06
SHC1P29353 TNRC18P2-201ENST00000417666 2714 ntBASIC14.65□□□□□ -0.06
SHC1P29353 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
SHC1P29353 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHC1P29353 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
SHC1P29353 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
SHC1P29353 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SHC1P29353 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SHC1P29353 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHC1P29353 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.65□□□□□ -0.06
SHC1P29353 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.65□□□□□ -0.06
SHC1P29353 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHC1P29353 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.65□□□□□ -0.06
SHC1P29353 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHC1P29353 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
SHC1P29353 AC112504.1-201ENST00000623415 1841 ntBASIC14.65□□□□□ -0.06
SHC1P29353 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHC1P29353 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHC1P29353 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
SHC1P29353 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.65□□□□□ -0.06
SHC1P29353 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHC1P29353 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.65□□□□□ -0.06
SHC1P29353 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.65□□□□□ -0.06
SHC1P29353 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
SHC1P29353 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.65□□□□□ -0.06
SHC1P29353 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHC1P29353 AC061975.2-201ENST00000581722 295 ntBASIC14.65□□□□□ -0.06
SHC1P29353 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHC1P29353 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHC1P29353 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.65□□□□□ -0.06
SHC1P29353 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.65□□□□□ -0.06
SHC1P29353 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
SHC1P29353 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHC1P29353 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHC1P29353 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHC1P29353 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SHC1P29353 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.65□□□□□ -0.06
SHC1P29353 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SHC1P29353 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHC1P29353 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
SHC1P29353 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHC1P29353 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
SHC1P29353 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.65□□□□□ -0.06
SHC1P29353 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SHC1P29353 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SHC1P29353 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.65□□□□□ -0.06
SHC1P29353 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.65□□□□□ -0.06
SHC1P29353 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
SHC1P29353 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SHC1P29353 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHC1P29353 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHC1P29353 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.64□□□□□ -0.07
SHC1P29353 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHC1P29353 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.64□□□□□ -0.07
SHC1P29353 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHC1P29353 CDC14C-201ENST00000428251 1719 ntBASIC14.64□□□□□ -0.07
SHC1P29353 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SHC1P29353 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.64□□□□□ -0.07
SHC1P29353 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHC1P29353 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHC1P29353 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHC1P29353 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SHC1P29353 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.64□□□□□ -0.07
SHC1P29353 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
SHC1P29353 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SHC1P29353 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SHC1P29353 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHC1P29353 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SHC1P29353 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHC1P29353 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHC1P29353 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SHC1P29353 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.64□□□□□ -0.07
SHC1P29353 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.64□□□□□ -0.07
SHC1P29353 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.64□□□□□ -0.07
SHC1P29353 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.64□□□□□ -0.07
SHC1P29353 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.64□□□□□ -0.07
SHC1P29353 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SHC1P29353 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.64□□□□□ -0.07
SHC1P29353 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.64□□□□□ -0.07
SHC1P29353 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
SHC1P29353 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.64□□□□□ -0.07
SHC1P29353 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.64□□□□□ -0.07
SHC1P29353 MIR6080-201ENST00000617359 66 ntBASIC14.64□□□□□ -0.07
SHC1P29353 AP001059.3-201ENST00000619053 235 ntBASIC14.64□□□□□ -0.07
SHC1P29353 Z92544.3-201ENST00000624747 417 ntBASIC14.64□□□□□ -0.07
SHC1P29353 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHC1P29353 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHC1P29353 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHC1P29353 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHC1P29353 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHC1P29353 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHC1P29353 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHC1P29353 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHC1P29353 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHC1P29353 AC008677.1-201ENST00000519230 1561 ntBASIC14.64□□□□□ -0.07
SHC1P29353 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SHC1P29353 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SHC1P29353 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms