Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
VARSP26640 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.75■□□□□ 0.11
VARSP26640 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
VARSP26640 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
VARSP26640 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VARSP26640 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VARSP26640 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.75■□□□□ 0.11
VARSP26640 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.75■□□□□ 0.11
VARSP26640 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
VARSP26640 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VARSP26640 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VARSP26640 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VARSP26640 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
VARSP26640 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.75■□□□□ 0.11
VARSP26640 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VARSP26640 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
VARSP26640 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
VARSP26640 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.74■□□□□ 0.11
VARSP26640 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VARSP26640 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.74■□□□□ 0.11
VARSP26640 AKAP8P1-201ENST00000434743 1349 ntBASIC15.74■□□□□ 0.11
VARSP26640 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
VARSP26640 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
VARSP26640 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.74■□□□□ 0.11
VARSP26640 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VARSP26640 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
VARSP26640 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.74■□□□□ 0.11
VARSP26640 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VARSP26640 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
VARSP26640 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VARSP26640 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VARSP26640 BCRP1-201ENST00000444246 691 ntBASIC15.74■□□□□ 0.11
VARSP26640 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.74■□□□□ 0.11
VARSP26640 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.74■□□□□ 0.11
VARSP26640 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.74■□□□□ 0.11
VARSP26640 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.74■□□□□ 0.11
VARSP26640 AC243562.1-201ENST00000560672 389 ntBASIC15.74■□□□□ 0.11
VARSP26640 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.74■□□□□ 0.11
VARSP26640 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.74■□□□□ 0.11
VARSP26640 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.74■□□□□ 0.11
VARSP26640 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
VARSP26640 TNRC18P2-201ENST00000417666 2714 ntBASIC15.74■□□□□ 0.11
VARSP26640 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
VARSP26640 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.74■□□□□ 0.11
VARSP26640 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VARSP26640 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.74■□□□□ 0.11
VARSP26640 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
VARSP26640 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VARSP26640 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.74■□□□□ 0.11
VARSP26640 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VARSP26640 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
VARSP26640 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VARSP26640 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.74■□□□□ 0.11
VARSP26640 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VARSP26640 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
VARSP26640 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.74■□□□□ 0.11
VARSP26640 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VARSP26640 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.73■□□□□ 0.11
VARSP26640 AL589702.1-201ENST00000641229 1509 ntBASIC15.73■□□□□ 0.11
VARSP26640 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
VARSP26640 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
VARSP26640 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
VARSP26640 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
VARSP26640 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.73■□□□□ 0.11
VARSP26640 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VARSP26640 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.73■□□□□ 0.11
VARSP26640 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
VARSP26640 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.73■□□□□ 0.11
VARSP26640 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.73■□□□□ 0.11
VARSP26640 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VARSP26640 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VARSP26640 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
VARSP26640 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
VARSP26640 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
VARSP26640 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
VARSP26640 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VARSP26640 SPDYE11-202ENST00000450699 704 ntBASIC15.73■□□□□ 0.11
VARSP26640 TIMM8BP1-201ENST00000452384 211 ntBASIC15.73■□□□□ 0.11
VARSP26640 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.73■□□□□ 0.11
VARSP26640 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.73■□□□□ 0.11
VARSP26640 FAM86C2P-203ENST00000528684 1004 ntBASIC15.73■□□□□ 0.11
VARSP26640 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VARSP26640 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
VARSP26640 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.73■□□□□ 0.11
VARSP26640 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.73■□□□□ 0.11
VARSP26640 SPDYE9P-201ENST00000570642 692 ntBASIC15.73■□□□□ 0.11
VARSP26640 AC015911.4-201ENST00000588022 1070 ntBASIC15.73■□□□□ 0.11
VARSP26640 AC027307.2-201ENST00000591252 911 ntBASIC15.73■□□□□ 0.11
VARSP26640 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
VARSP26640 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.73■□□□□ 0.11
VARSP26640 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.73■□□□□ 0.11
VARSP26640 AC026120.1-201ENST00000611536 926 ntBASIC15.73■□□□□ 0.11
VARSP26640 SPDYE10P-202ENST00000612005 668 ntBASIC15.73■□□□□ 0.11
VARSP26640 SPDYE8P-202ENST00000612377 668 ntBASIC15.73■□□□□ 0.11
VARSP26640 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.73■□□□□ 0.11
VARSP26640 AC105339.1-204ENST00000636249 355 ntBASIC15.73■□□□□ 0.11
VARSP26640 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.73■□□□□ 0.11
VARSP26640 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.73■□□□□ 0.11
VARSP26640 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.73■□□□□ 0.11
VARSP26640 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms