Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.4■□□□□ 0.06
CAPN3P20807 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.4■□□□□ 0.06
CAPN3P20807 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CAPN3P20807 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
CAPN3P20807 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.4■□□□□ 0.06
CAPN3P20807 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.4■□□□□ 0.06
CAPN3P20807 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CAPN3P20807 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
CAPN3P20807 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CAPN3P20807 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CAPN3P20807 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CAPN3P20807 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CAPN3P20807 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CAPN3P20807 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.4■□□□□ 0.06
CAPN3P20807 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CAPN3P20807 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.4■□□□□ 0.06
CAPN3P20807 C18orf15-201ENST00000623680 2534 ntBASIC15.4■□□□□ 0.06
CAPN3P20807 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CAPN3P20807 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CAPN3P20807 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CAPN3P20807 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CAPN3P20807 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.39■□□□□ 0.05
CAPN3P20807 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CAPN3P20807 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CAPN3P20807 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CAPN3P20807 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CAPN3P20807 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CAPN3P20807 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CAPN3P20807 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CAPN3P20807 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
CAPN3P20807 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CAPN3P20807 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CAPN3P20807 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CAPN3P20807 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CAPN3P20807 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.39■□□□□ 0.05
CAPN3P20807 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CAPN3P20807 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CAPN3P20807 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CAPN3P20807 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CAPN3P20807 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
CAPN3P20807 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.39■□□□□ 0.05
CAPN3P20807 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.39■□□□□ 0.05
CAPN3P20807 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CAPN3P20807 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.39■□□□□ 0.05
CAPN3P20807 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.39■□□□□ 0.05
CAPN3P20807 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
CAPN3P20807 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.39■□□□□ 0.05
CAPN3P20807 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
CAPN3P20807 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CAPN3P20807 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CAPN3P20807 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CAPN3P20807 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.39■□□□□ 0.05
CAPN3P20807 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.39■□□□□ 0.05
CAPN3P20807 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.39■□□□□ 0.05
CAPN3P20807 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CAPN3P20807 AP001282.1-201ENST00000531301 1499 ntBASIC15.39■□□□□ 0.05
CAPN3P20807 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.39■□□□□ 0.05
CAPN3P20807 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CAPN3P20807 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CAPN3P20807 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CAPN3P20807 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CAPN3P20807 AC106881.1-201ENST00000605849 3329 ntBASIC15.38■□□□□ 0.05
CAPN3P20807 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.38■□□□□ 0.05
CAPN3P20807 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CAPN3P20807 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.38■□□□□ 0.05
CAPN3P20807 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CAPN3P20807 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CAPN3P20807 AL589702.1-201ENST00000641229 1509 ntBASIC15.38■□□□□ 0.05
CAPN3P20807 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CAPN3P20807 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CAPN3P20807 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.38■□□□□ 0.05
CAPN3P20807 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CAPN3P20807 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
CAPN3P20807 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CAPN3P20807 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CAPN3P20807 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CAPN3P20807 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.38■□□□□ 0.05
CAPN3P20807 PRSS29P-201ENST00000440800 595 ntBASIC15.38■□□□□ 0.05
CAPN3P20807 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.38■□□□□ 0.05
CAPN3P20807 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.38■□□□□ 0.05
CAPN3P20807 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CAPN3P20807 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CAPN3P20807 AC109635.5-201ENST00000533593 962 ntBASIC15.38■□□□□ 0.05
CAPN3P20807 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.38■□□□□ 0.05
CAPN3P20807 SPCS2P1-201ENST00000561636 679 ntBASIC15.38■□□□□ 0.05
CAPN3P20807 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.38■□□□□ 0.05
CAPN3P20807 MIR4751-201ENST00000578027 74 ntBASIC15.38■□□□□ 0.05
CAPN3P20807 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.38■□□□□ 0.05
CAPN3P20807 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.38■□□□□ 0.05
CAPN3P20807 MIR4321-201ENST00000592276 80 ntBASIC15.38■□□□□ 0.05
CAPN3P20807 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.38■□□□□ 0.05
CAPN3P20807 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.38■□□□□ 0.05
CAPN3P20807 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CAPN3P20807 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CAPN3P20807 AC073439.1-201ENST00000624121 1774 ntBASIC15.38■□□□□ 0.05
CAPN3P20807 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CAPN3P20807 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.38■□□□□ 0.05
CAPN3P20807 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
CAPN3P20807 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CAPN3P20807 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms