Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TNFRSF1BP20333 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TNFRSF1BP20333 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.85□□□□□ -0.03
TNFRSF1BP20333 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TNFRSF1BP20333 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TNFRSF1BP20333 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
TNFRSF1BP20333 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.85□□□□□ -0.03
TNFRSF1BP20333 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.85□□□□□ -0.03
TNFRSF1BP20333 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TNFRSF1BP20333 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TNFRSF1BP20333 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TNFRSF1BP20333 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TNFRSF1BP20333 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TNFRSF1BP20333 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TNFRSF1BP20333 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.85□□□□□ -0.03
TNFRSF1BP20333 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.85□□□□□ -0.03
TNFRSF1BP20333 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TNFRSF1BP20333 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
TNFRSF1BP20333 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TNFRSF1BP20333 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.84□□□□□ -0.03
TNFRSF1BP20333 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.84□□□□□ -0.03
TNFRSF1BP20333 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
TNFRSF1BP20333 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
TNFRSF1BP20333 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TNFRSF1BP20333 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.84□□□□□ -0.03
TNFRSF1BP20333 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.84□□□□□ -0.03
TNFRSF1BP20333 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TNFRSF1BP20333 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TNFRSF1BP20333 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
TNFRSF1BP20333 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TNFRSF1BP20333 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TNFRSF1BP20333 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.84□□□□□ -0.03
TNFRSF1BP20333 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TNFRSF1BP20333 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.84□□□□□ -0.03
TNFRSF1BP20333 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
TNFRSF1BP20333 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TNFRSF1BP20333 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
TNFRSF1BP20333 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TNFRSF1BP20333 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.84□□□□□ -0.03
TNFRSF1BP20333 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.84□□□□□ -0.03
TNFRSF1BP20333 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.84□□□□□ -0.03
TNFRSF1BP20333 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.84□□□□□ -0.03
TNFRSF1BP20333 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.84□□□□□ -0.03
TNFRSF1BP20333 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TNFRSF1BP20333 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TNFRSF1BP20333 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.84□□□□□ -0.03
TNFRSF1BP20333 HLA-A-201ENST00000376802 1334 ntBASIC14.84□□□□□ -0.03
TNFRSF1BP20333 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.84□□□□□ -0.03
TNFRSF1BP20333 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.84□□□□□ -0.03
TNFRSF1BP20333 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TNFRSF1BP20333 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.84□□□□□ -0.03
TNFRSF1BP20333 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TNFRSF1BP20333 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TNFRSF1BP20333 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TNFRSF1BP20333 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
TNFRSF1BP20333 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TNFRSF1BP20333 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TNFRSF1BP20333 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.84□□□□□ -0.03
TNFRSF1BP20333 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TNFRSF1BP20333 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
TNFRSF1BP20333 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TNFRSF1BP20333 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
TNFRSF1BP20333 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TNFRSF1BP20333 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.83□□□□□ -0.03
TNFRSF1BP20333 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.83□□□□□ -0.03
TNFRSF1BP20333 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.83□□□□□ -0.03
TNFRSF1BP20333 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
TNFRSF1BP20333 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TNFRSF1BP20333 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TNFRSF1BP20333 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
TNFRSF1BP20333 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.83□□□□□ -0.04
TNFRSF1BP20333 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
TNFRSF1BP20333 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.83□□□□□ -0.04
TNFRSF1BP20333 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TNFRSF1BP20333 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.83□□□□□ -0.04
TNFRSF1BP20333 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.83□□□□□ -0.04
TNFRSF1BP20333 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TNFRSF1BP20333 AC079776.4-201ENST00000511039 504 ntBASIC14.83□□□□□ -0.04
TNFRSF1BP20333 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC14.83□□□□□ -0.04
TNFRSF1BP20333 AC034105.1-201ENST00000563488 319 ntBASIC14.83□□□□□ -0.04
TNFRSF1BP20333 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.83□□□□□ -0.04
TNFRSF1BP20333 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.83□□□□□ -0.04
TNFRSF1BP20333 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.83□□□□□ -0.04
TNFRSF1BP20333 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.83□□□□□ -0.04
TNFRSF1BP20333 AL513190.1-201ENST00000621254 727 ntBASIC14.83□□□□□ -0.04
TNFRSF1BP20333 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TNFRSF1BP20333 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.83□□□□□ -0.04
TNFRSF1BP20333 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TNFRSF1BP20333 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.83□□□□□ -0.04
TNFRSF1BP20333 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TNFRSF1BP20333 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TNFRSF1BP20333 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
TNFRSF1BP20333 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.83□□□□□ -0.04
TNFRSF1BP20333 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.83□□□□□ -0.04
TNFRSF1BP20333 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TNFRSF1BP20333 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TNFRSF1BP20333 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TNFRSF1BP20333 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
TNFRSF1BP20333 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TNFRSF1BP20333 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms