Protein–RNA interactions for Protein: P16112

ACAN, Aggrecan core protein, humanhuman

Predictions only

Length 2,415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACANP16112 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC12.87□□□□□ -0.35
ACANP16112 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC12.87□□□□□ -0.35
ACANP16112 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC12.87□□□□□ -0.35
ACANP16112 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC12.87□□□□□ -0.35
ACANP16112 AL133466.1-201ENST00000447582 150 ntBASIC12.87□□□□□ -0.35
ACANP16112 KRT18P25-201ENST00000508931 1278 ntBASIC12.87□□□□□ -0.35
ACANP16112 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ACANP16112 AC015910.1-201ENST00000579400 975 ntBASIC12.87□□□□□ -0.35
ACANP16112 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC12.87□□□□□ -0.35
ACANP16112 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC12.87□□□□□ -0.35
ACANP16112 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
ACANP16112 ETV2-208ENST00000621247 941 ntTSL 5 BASIC12.87□□□□□ -0.35
ACANP16112 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
ACANP16112 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC12.87□□□□□ -0.35
ACANP16112 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC12.86□□□□□ -0.35
ACANP16112 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ACANP16112 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
ACANP16112 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
ACANP16112 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ACANP16112 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ACANP16112 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ACANP16112 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC12.86□□□□□ -0.35
ACANP16112 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.86□□□□□ -0.35
ACANP16112 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ACANP16112 AGER-206ENST00000375070 1463 ntTSL 5 BASIC12.86□□□□□ -0.35
ACANP16112 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ACANP16112 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC12.86□□□□□ -0.35
ACANP16112 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ACANP16112 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC12.86□□□□□ -0.35
ACANP16112 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ACANP16112 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC12.86□□□□□ -0.35
ACANP16112 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ACANP16112 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ACANP16112 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
ACANP16112 AC007274.2-201ENST00000421675 662 ntBASIC12.86□□□□□ -0.35
ACANP16112 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC12.86□□□□□ -0.35
ACANP16112 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
ACANP16112 AC141586.1-203ENST00000567242 366 ntBASIC12.86□□□□□ -0.35
ACANP16112 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ACANP16112 CENPX-208ENST00000584347 799 ntTSL 2 BASIC12.86□□□□□ -0.35
ACANP16112 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC12.86□□□□□ -0.35
ACANP16112 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ACANP16112 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ACANP16112 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ACANP16112 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC12.86□□□□□ -0.35
ACANP16112 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
ACANP16112 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
ACANP16112 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
ACANP16112 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ACANP16112 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
ACANP16112 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ACANP16112 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ACANP16112 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ACANP16112 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
ACANP16112 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ACANP16112 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ACANP16112 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
ACANP16112 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ACANP16112 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ACANP16112 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ACANP16112 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC12.86□□□□□ -0.35
ACANP16112 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ACANP16112 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC12.86□□□□□ -0.35
ACANP16112 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ACANP16112 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ACANP16112 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.86□□□□□ -0.35
ACANP16112 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ACANP16112 ACTG1P2-201ENST00000415776 1125 ntBASIC12.86□□□□□ -0.35
ACANP16112 ACTG1P11-201ENST00000425411 1125 ntBASIC12.86□□□□□ -0.35
ACANP16112 RGS5-214ENST00000429865 754 ntTSL 3 BASIC12.86□□□□□ -0.35
ACANP16112 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
ACANP16112 AC098935.1-201ENST00000446057 611 ntBASIC12.86□□□□□ -0.35
ACANP16112 NEU3-205ENST00000531619 582 ntTSL 5 BASIC12.86□□□□□ -0.35
ACANP16112 TBCB-211ENST00000589996 724 ntTSL 3 BASIC12.86□□□□□ -0.35
ACANP16112 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.86□□□□□ -0.35
ACANP16112 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ACANP16112 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
ACANP16112 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
ACANP16112 AC008764.6-201ENST00000595909 2069 ntBASIC12.85□□□□□ -0.35
ACANP16112 AC018892.3-201ENST00000623986 2499 ntBASIC12.85□□□□□ -0.35
ACANP16112 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
ACANP16112 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
ACANP16112 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
ACANP16112 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC12.85□□□□□ -0.35
ACANP16112 ZBTB45P2-201ENST00000452245 1531 ntBASIC12.85□□□□□ -0.35
ACANP16112 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ACANP16112 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ACANP16112 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ACANP16112 BCL2-203ENST00000589955 5011 ntBASIC12.85□□□□□ -0.35
ACANP16112 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
ACANP16112 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC12.85□□□□□ -0.35
ACANP16112 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC12.85□□□□□ -0.35
ACANP16112 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
ACANP16112 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ACANP16112 OS9-205ENST00000413095 1660 ntTSL 2 BASIC12.85□□□□□ -0.35
ACANP16112 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ACANP16112 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ACANP16112 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ACANP16112 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
ACANP16112 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms