Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 AC079776.1-201ENST00000401540 1152 ntBASIC18.26■□□□□ 0.51
BMP3P12645 AC112492.5-201ENST00000421897 457 ntBASIC18.26■□□□□ 0.51
BMP3P12645 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC18.26■□□□□ 0.51
BMP3P12645 AC134915.1-201ENST00000426461 574 ntBASIC18.26■□□□□ 0.51
BMP3P12645 KRT18P43-201ENST00000469825 1281 ntBASIC18.26■□□□□ 0.51
BMP3P12645 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC18.26■□□□□ 0.51
BMP3P12645 IGHV3-71-201ENST00000523324 359 ntBASIC18.26■□□□□ 0.51
BMP3P12645 KRT17P8-201ENST00000540749 863 ntBASIC18.26■□□□□ 0.51
BMP3P12645 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC18.26■□□□□ 0.51
BMP3P12645 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC18.26■□□□□ 0.51
BMP3P12645 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
BMP3P12645 APOC4-201ENST00000591600 348 ntTSL 3 BASIC18.26■□□□□ 0.51
BMP3P12645 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC18.26■□□□□ 0.51
BMP3P12645 AL359881.2-201ENST00000602973 570 ntBASIC18.26■□□□□ 0.51
BMP3P12645 AC000095.1-201ENST00000603208 874 ntBASIC18.26■□□□□ 0.51
BMP3P12645 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC18.26■□□□□ 0.51
BMP3P12645 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC18.26■□□□□ 0.51
BMP3P12645 RPSAP52-203ENST00000622976 1023 ntBASIC18.26■□□□□ 0.51
BMP3P12645 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
BMP3P12645 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BMP3P12645 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC18.26■□□□□ 0.51
BMP3P12645 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.26■□□□□ 0.51
BMP3P12645 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BMP3P12645 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
BMP3P12645 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
BMP3P12645 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
BMP3P12645 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
BMP3P12645 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
BMP3P12645 LINC02447-202ENST00000501888 2146 ntBASIC18.25■□□□□ 0.51
BMP3P12645 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
BMP3P12645 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BMP3P12645 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
BMP3P12645 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC18.25■□□□□ 0.51
BMP3P12645 AL162726.2-201ENST00000438986 1017 ntBASIC18.25■□□□□ 0.51
BMP3P12645 RPL13AP25-201ENST00000484130 612 ntBASIC18.25■□□□□ 0.51
BMP3P12645 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
BMP3P12645 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC18.25■□□□□ 0.51
BMP3P12645 AC008735.3-201ENST00000596646 500 ntBASIC18.25■□□□□ 0.51
BMP3P12645 AL049840.4-201ENST00000602422 811 ntBASIC18.25■□□□□ 0.51
BMP3P12645 CU634019.7-201ENST00000624153 1185 ntBASIC18.25■□□□□ 0.51
BMP3P12645 FP236241.2-201ENST00000624906 1185 ntBASIC18.25■□□□□ 0.51
BMP3P12645 ABBA01031660.1-201ENST00000635219 756 ntBASIC18.25■□□□□ 0.51
BMP3P12645 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC18.25■□□□□ 0.51
BMP3P12645 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.25■□□□□ 0.51
BMP3P12645 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
BMP3P12645 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC18.25■□□□□ 0.51
BMP3P12645 HNRNPA1P48-201ENST00000562726 1377 ntBASIC18.25■□□□□ 0.51
BMP3P12645 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
BMP3P12645 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.25■□□□□ 0.51
BMP3P12645 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
BMP3P12645 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BMP3P12645 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
BMP3P12645 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
BMP3P12645 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BMP3P12645 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
BMP3P12645 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
BMP3P12645 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
BMP3P12645 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BMP3P12645 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.24■□□□□ 0.51
BMP3P12645 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC18.24■□□□□ 0.51
BMP3P12645 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
BMP3P12645 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
BMP3P12645 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC18.24■□□□□ 0.51
BMP3P12645 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
BMP3P12645 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BMP3P12645 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
BMP3P12645 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
BMP3P12645 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
BMP3P12645 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
BMP3P12645 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
BMP3P12645 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
BMP3P12645 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
BMP3P12645 INTS4P2-202ENST00000614726 2019 ntBASIC18.24■□□□□ 0.51
BMP3P12645 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BMP3P12645 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
BMP3P12645 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
BMP3P12645 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
BMP3P12645 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
BMP3P12645 ACA64.2-201ENST00000459014 129 ntBASIC18.24■□□□□ 0.51
BMP3P12645 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC18.24■□□□□ 0.51
BMP3P12645 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC18.24■□□□□ 0.51
BMP3P12645 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC18.24■□□□□ 0.51
BMP3P12645 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC18.24■□□□□ 0.51
BMP3P12645 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BMP3P12645 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC18.24■□□□□ 0.51
BMP3P12645 AC015936.2-201ENST00000593177 259 ntBASIC18.24■□□□□ 0.51
BMP3P12645 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC18.24■□□□□ 0.51
BMP3P12645 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
BMP3P12645 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
BMP3P12645 CYP2AB1P-202ENST00000454440 1456 ntBASIC18.24■□□□□ 0.51
BMP3P12645 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BMP3P12645 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC18.24■□□□□ 0.51
BMP3P12645 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC18.24■□□□□ 0.51
BMP3P12645 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
BMP3P12645 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
BMP3P12645 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BMP3P12645 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BMP3P12645 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
BMP3P12645 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
BMP3P12645 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms