Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
THRAP10827 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
THRAP10827 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.06■□□□□ 0.16
THRAP10827 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
THRAP10827 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
THRAP10827 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
THRAP10827 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
THRAP10827 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
THRAP10827 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
THRAP10827 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
THRAP10827 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
THRAP10827 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.05■□□□□ 0.16
THRAP10827 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
THRAP10827 AC016027.1-202ENST00000607927 1699 ntBASIC16.05■□□□□ 0.16
THRAP10827 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
THRAP10827 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.05■□□□□ 0.16
THRAP10827 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
THRAP10827 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
THRAP10827 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
THRAP10827 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
THRAP10827 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.05■□□□□ 0.16
THRAP10827 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
THRAP10827 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
THRAP10827 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
THRAP10827 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
THRAP10827 PRAL-201ENST00000624952 3286 ntBASIC16.05■□□□□ 0.16
THRAP10827 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.05■□□□□ 0.16
THRAP10827 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
THRAP10827 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.05■□□□□ 0.16
THRAP10827 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
THRAP10827 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
THRAP10827 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
THRAP10827 SPDYE7P-202ENST00000420373 878 ntBASIC16.05■□□□□ 0.16
THRAP10827 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.05■□□□□ 0.16
THRAP10827 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.05■□□□□ 0.16
THRAP10827 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.05■□□□□ 0.16
THRAP10827 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.05■□□□□ 0.16
THRAP10827 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
THRAP10827 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
THRAP10827 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.05■□□□□ 0.16
THRAP10827 AC093214.1-201ENST00000511688 1107 ntBASIC16.05■□□□□ 0.16
THRAP10827 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
THRAP10827 SLC25A39P2-201ENST00000537614 270 ntBASIC16.05■□□□□ 0.16
THRAP10827 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.05■□□□□ 0.16
THRAP10827 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.05■□□□□ 0.16
THRAP10827 AP000842.3-202ENST00000569238 1080 ntBASIC16.05■□□□□ 0.16
THRAP10827 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.05■□□□□ 0.16
THRAP10827 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.05■□□□□ 0.16
THRAP10827 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
THRAP10827 CYP2A7P1-201ENST00000595391 815 ntBASIC16.05■□□□□ 0.16
THRAP10827 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.05■□□□□ 0.16
THRAP10827 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.05■□□□□ 0.16
THRAP10827 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.05■□□□□ 0.16
THRAP10827 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
THRAP10827 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
THRAP10827 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
THRAP10827 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
THRAP10827 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.05■□□□□ 0.16
THRAP10827 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.05■□□□□ 0.16
THRAP10827 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
THRAP10827 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
THRAP10827 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
THRAP10827 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
THRAP10827 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
THRAP10827 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
THRAP10827 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
THRAP10827 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.04■□□□□ 0.16
THRAP10827 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
THRAP10827 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.04■□□□□ 0.16
THRAP10827 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
THRAP10827 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
THRAP10827 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
THRAP10827 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
THRAP10827 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
THRAP10827 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
THRAP10827 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
THRAP10827 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
THRAP10827 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
THRAP10827 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
THRAP10827 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.04■□□□□ 0.16
THRAP10827 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.04■□□□□ 0.16
THRAP10827 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.04■□□□□ 0.16
THRAP10827 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.04■□□□□ 0.16
THRAP10827 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.04■□□□□ 0.16
THRAP10827 AC125807.1-201ENST00000483097 614 ntBASIC16.04■□□□□ 0.16
THRAP10827 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.04■□□□□ 0.16
THRAP10827 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.04■□□□□ 0.16
THRAP10827 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.04■□□□□ 0.16
THRAP10827 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.04■□□□□ 0.16
THRAP10827 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.04■□□□□ 0.16
THRAP10827 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
THRAP10827 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
THRAP10827 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
THRAP10827 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.04■□□□□ 0.16
THRAP10827 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
THRAP10827 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
THRAP10827 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
THRAP10827 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
THRAP10827 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.04■□□□□ 0.16
THRAP10827 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms