Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB40ALP0C0E4 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
RAB40ALP0C0E4 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.01□□□□□ -0.01
RAB40ALP0C0E4 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.01□□□□□ -0.01
RAB40ALP0C0E4 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
RAB40ALP0C0E4 ELK1P1-201ENST00000485699 580 ntBASIC15.01□□□□□ -0.01
RAB40ALP0C0E4 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RAB40ALP0C0E4 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.01□□□□□ -0.01
RAB40ALP0C0E4 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
RAB40ALP0C0E4 AC106886.1-201ENST00000568660 600 ntBASIC15.01□□□□□ -0.01
RAB40ALP0C0E4 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.01□□□□□ -0.01
RAB40ALP0C0E4 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
RAB40ALP0C0E4 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.01□□□□□ -0.01
RAB40ALP0C0E4 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.01□□□□□ -0.01
RAB40ALP0C0E4 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB40ALP0C0E4 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB40ALP0C0E4 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB40ALP0C0E4 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RAB40ALP0C0E4 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RAB40ALP0C0E4 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB40ALP0C0E4 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.01□□□□□ -0.01
RAB40ALP0C0E4 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB40ALP0C0E4 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.01□□□□□ -0.01
RAB40ALP0C0E4 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15□□□□□ -0.01
RAB40ALP0C0E4 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
RAB40ALP0C0E4 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
RAB40ALP0C0E4 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAB40ALP0C0E4 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15□□□□□ -0.01
RAB40ALP0C0E4 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
RAB40ALP0C0E4 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
RAB40ALP0C0E4 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
RAB40ALP0C0E4 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAB40ALP0C0E4 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
RAB40ALP0C0E4 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
RAB40ALP0C0E4 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
RAB40ALP0C0E4 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
RAB40ALP0C0E4 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
RAB40ALP0C0E4 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAB40ALP0C0E4 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAB40ALP0C0E4 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15□□□□□ -0.01
RAB40ALP0C0E4 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAB40ALP0C0E4 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15□□□□□ -0.01
RAB40ALP0C0E4 ARSEP1-201ENST00000420443 635 ntBASIC15□□□□□ -0.01
RAB40ALP0C0E4 ATP5G2P4-201ENST00000442175 420 ntBASIC15□□□□□ -0.01
RAB40ALP0C0E4 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15□□□□□ -0.01
RAB40ALP0C0E4 AC104596.2-201ENST00000512793 793 ntBASIC15□□□□□ -0.01
RAB40ALP0C0E4 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15□□□□□ -0.01
RAB40ALP0C0E4 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15□□□□□ -0.01
RAB40ALP0C0E4 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15□□□□□ -0.01
RAB40ALP0C0E4 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15□□□□□ -0.01
RAB40ALP0C0E4 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15□□□□□ -0.01
RAB40ALP0C0E4 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15□□□□□ -0.01
RAB40ALP0C0E4 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15□□□□□ -0.01
RAB40ALP0C0E4 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15□□□□□ -0.01
RAB40ALP0C0E4 AL162274.1-201ENST00000617191 1098 ntBASIC15□□□□□ -0.01
RAB40ALP0C0E4 MIR6752-201ENST00000618442 71 ntBASIC15□□□□□ -0.01
RAB40ALP0C0E4 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
RAB40ALP0C0E4 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15□□□□□ -0.01
RAB40ALP0C0E4 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
RAB40ALP0C0E4 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15□□□□□ -0.01
RAB40ALP0C0E4 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAB40ALP0C0E4 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAB40ALP0C0E4 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAB40ALP0C0E4 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15□□□□□ -0.01
RAB40ALP0C0E4 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15□□□□□ -0.01
RAB40ALP0C0E4 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15□□□□□ -0.01
RAB40ALP0C0E4 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAB40ALP0C0E4 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15□□□□□ -0.01
RAB40ALP0C0E4 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
RAB40ALP0C0E4 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15□□□□□ -0.01
RAB40ALP0C0E4 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15□□□□□ -0.01
RAB40ALP0C0E4 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15□□□□□ -0.01
RAB40ALP0C0E4 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAB40ALP0C0E4 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAB40ALP0C0E4 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAB40ALP0C0E4 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15□□□□□ -0.01
RAB40ALP0C0E4 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.99□□□□□ -0.01
RAB40ALP0C0E4 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.99□□□□□ -0.01
RAB40ALP0C0E4 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAB40ALP0C0E4 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.99□□□□□ -0.01
RAB40ALP0C0E4 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RAB40ALP0C0E4 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAB40ALP0C0E4 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RAB40ALP0C0E4 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RAB40ALP0C0E4 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.99□□□□□ -0.01
RAB40ALP0C0E4 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAB40ALP0C0E4 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RAB40ALP0C0E4 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAB40ALP0C0E4 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
RAB40ALP0C0E4 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAB40ALP0C0E4 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
RAB40ALP0C0E4 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.99□□□□□ -0.01
RAB40ALP0C0E4 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.99□□□□□ -0.01
RAB40ALP0C0E4 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
RAB40ALP0C0E4 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.99□□□□□ -0.01
RAB40ALP0C0E4 AC132938.2-201ENST00000579188 680 ntBASIC14.99□□□□□ -0.01
RAB40ALP0C0E4 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.99□□□□□ -0.01
RAB40ALP0C0E4 CTBP2P3-201ENST00000585629 1255 ntBASIC14.99□□□□□ -0.01
RAB40ALP0C0E4 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.99□□□□□ -0.01
RAB40ALP0C0E4 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms