Protein–RNA interactions for Protein: P07333

CSF1R, Macrophage colony-stimulating factor 1 receptor, humanhuman

Predictions only

Length 972 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1RP07333 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CSF1RP07333 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CSF1RP07333 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CSF1RP07333 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC19.36■□□□□ 0.69
CSF1RP07333 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CSF1RP07333 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.36■□□□□ 0.69
CSF1RP07333 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CSF1RP07333 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CSF1RP07333 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CSF1RP07333 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
CSF1RP07333 AC010491.1-201ENST00000563101 2797 ntBASIC19.36■□□□□ 0.69
CSF1RP07333 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CSF1RP07333 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CSF1RP07333 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CSF1RP07333 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CSF1RP07333 AC093525.8-201ENST00000624099 1342 ntBASIC19.36■□□□□ 0.69
CSF1RP07333 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CSF1RP07333 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CSF1RP07333 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CSF1RP07333 RPL28-203ENST00000428193 573 ntTSL 2 BASIC19.36■□□□□ 0.69
CSF1RP07333 RPL28-204ENST00000431533 590 ntTSL 2 BASIC19.36■□□□□ 0.69
CSF1RP07333 AC022137.2-201ENST00000503482 481 ntBASIC19.36■□□□□ 0.69
CSF1RP07333 AC104989.1-201ENST00000519711 778 ntBASIC19.36■□□□□ 0.69
CSF1RP07333 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
CSF1RP07333 RPL28-207ENST00000558815 616 ntTSL 2 BASIC19.36■□□□□ 0.69
CSF1RP07333 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC19.36■□□□□ 0.69
CSF1RP07333 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CSF1RP07333 METTL26-214ENST00000614890 801 ntTSL 3 BASIC19.36■□□□□ 0.69
CSF1RP07333 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CSF1RP07333 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CSF1RP07333 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CSF1RP07333 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC19.36■□□□□ 0.69
CSF1RP07333 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CSF1RP07333 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CSF1RP07333 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CSF1RP07333 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC19.35■□□□□ 0.69
CSF1RP07333 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CSF1RP07333 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CSF1RP07333 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CSF1RP07333 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CSF1RP07333 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CSF1RP07333 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CSF1RP07333 AC134312.5-201ENST00000568031 1313 ntBASIC19.35■□□□□ 0.69
CSF1RP07333 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CSF1RP07333 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CSF1RP07333 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CSF1RP07333 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CSF1RP07333 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CSF1RP07333 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC19.35■□□□□ 0.69
CSF1RP07333 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC19.35■□□□□ 0.69
CSF1RP07333 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC19.35■□□□□ 0.69
CSF1RP07333 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CSF1RP07333 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CSF1RP07333 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CSF1RP07333 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CSF1RP07333 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CSF1RP07333 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CSF1RP07333 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC19.35■□□□□ 0.69
CSF1RP07333 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CSF1RP07333 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CSF1RP07333 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CSF1RP07333 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CSF1RP07333 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CSF1RP07333 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CSF1RP07333 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
CSF1RP07333 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CSF1RP07333 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CSF1RP07333 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC19.34■□□□□ 0.69
CSF1RP07333 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC19.34■□□□□ 0.69
CSF1RP07333 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CSF1RP07333 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC19.34■□□□□ 0.69
CSF1RP07333 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CSF1RP07333 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.34■□□□□ 0.69
CSF1RP07333 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CSF1RP07333 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CSF1RP07333 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CSF1RP07333 MPV17-208ENST00000405076 603 ntTSL 5 BASIC19.34■□□□□ 0.69
CSF1RP07333 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CSF1RP07333 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CSF1RP07333 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC19.34■□□□□ 0.69
CSF1RP07333 KRT223P-202ENST00000449164 1292 ntBASIC19.34■□□□□ 0.69
CSF1RP07333 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC19.34■□□□□ 0.69
CSF1RP07333 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CSF1RP07333 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC19.34■□□□□ 0.69
CSF1RP07333 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC19.34■□□□□ 0.69
CSF1RP07333 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CSF1RP07333 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CSF1RP07333 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CSF1RP07333 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC19.34■□□□□ 0.69
CSF1RP07333 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CSF1RP07333 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CSF1RP07333 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CSF1RP07333 AL138799.1-201ENST00000448213 1675 ntBASIC19.33■□□□□ 0.69
CSF1RP07333 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
CSF1RP07333 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CSF1RP07333 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CSF1RP07333 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
CSF1RP07333 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
CSF1RP07333 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC19.33■□□□□ 0.69
CSF1RP07333 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms