Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.29□□□□□ -0.12
APOA1P02647 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.29□□□□□ -0.12
APOA1P02647 REXO1L2P-201ENST00000425429 2069 ntBASIC14.29□□□□□ -0.12
APOA1P02647 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.29□□□□□ -0.12
APOA1P02647 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOA1P02647 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
APOA1P02647 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.29□□□□□ -0.12
APOA1P02647 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOA1P02647 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOA1P02647 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOA1P02647 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
APOA1P02647 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
APOA1P02647 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.29□□□□□ -0.12
APOA1P02647 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
APOA1P02647 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC14.29□□□□□ -0.12
APOA1P02647 AL020989.1-201ENST00000422979 469 ntBASIC14.29□□□□□ -0.12
APOA1P02647 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.29□□□□□ -0.12
APOA1P02647 VENTXP5-201ENST00000523979 775 ntBASIC14.29□□□□□ -0.12
APOA1P02647 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC14.29□□□□□ -0.12
APOA1P02647 MIR4492-201ENST00000581627 80 ntBASIC14.29□□□□□ -0.12
APOA1P02647 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC14.29□□□□□ -0.12
APOA1P02647 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
APOA1P02647 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
APOA1P02647 AC124864.1-201ENST00000623408 392 ntBASIC14.29□□□□□ -0.12
APOA1P02647 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC14.29□□□□□ -0.12
APOA1P02647 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOA1P02647 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
APOA1P02647 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.29□□□□□ -0.12
APOA1P02647 AC148477.5-201ENST00000625164 1645 ntBASIC14.29□□□□□ -0.12
APOA1P02647 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOA1P02647 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.29□□□□□ -0.12
APOA1P02647 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.29□□□□□ -0.12
APOA1P02647 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
APOA1P02647 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOA1P02647 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOA1P02647 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.29□□□□□ -0.12
APOA1P02647 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOA1P02647 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.29□□□□□ -0.12
APOA1P02647 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
APOA1P02647 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOA1P02647 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
APOA1P02647 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOA1P02647 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOA1P02647 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOA1P02647 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOA1P02647 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
APOA1P02647 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOA1P02647 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOA1P02647 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOA1P02647 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.28□□□□□ -0.12
APOA1P02647 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOA1P02647 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOA1P02647 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC14.28□□□□□ -0.12
APOA1P02647 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOA1P02647 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.28□□□□□ -0.12
APOA1P02647 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOA1P02647 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
APOA1P02647 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOA1P02647 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOA1P02647 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOA1P02647 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
APOA1P02647 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.28□□□□□ -0.12
APOA1P02647 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOA1P02647 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
APOA1P02647 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
APOA1P02647 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
APOA1P02647 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
APOA1P02647 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.28□□□□□ -0.12
APOA1P02647 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
APOA1P02647 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC14.28□□□□□ -0.12
APOA1P02647 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
APOA1P02647 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC14.28□□□□□ -0.12
APOA1P02647 TSPY20P-201ENST00000450910 630 ntBASIC14.28□□□□□ -0.12
APOA1P02647 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.28□□□□□ -0.12
APOA1P02647 SNORA78-201ENST00000459373 127 ntBASIC14.28□□□□□ -0.12
APOA1P02647 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
APOA1P02647 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.28□□□□□ -0.12
APOA1P02647 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.28□□□□□ -0.12
APOA1P02647 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.28□□□□□ -0.12
APOA1P02647 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
APOA1P02647 PMPCAP1-201ENST00000508114 1576 ntBASIC14.28□□□□□ -0.12
APOA1P02647 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOA1P02647 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
APOA1P02647 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOA1P02647 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC14.28□□□□□ -0.12
APOA1P02647 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC14.28□□□□□ -0.12
APOA1P02647 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOA1P02647 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.28□□□□□ -0.12
APOA1P02647 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
APOA1P02647 AC011558.1-201ENST00000623459 338 ntBASIC14.28□□□□□ -0.12
APOA1P02647 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
APOA1P02647 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.28□□□□□ -0.12
APOA1P02647 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOA1P02647 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC14.28□□□□□ -0.12
APOA1P02647 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOA1P02647 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOA1P02647 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOA1P02647 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOA1P02647 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
APOA1P02647 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms