Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC19.07■□□□□ 0.64
COL4A1P02462 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC19.07■□□□□ 0.64
COL4A1P02462 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL4A1P02462 TBCB-211ENST00000589996 724 ntTSL 3 BASIC19.07■□□□□ 0.64
COL4A1P02462 ETV2-208ENST00000621247 941 ntTSL 5 BASIC19.07■□□□□ 0.64
COL4A1P02462 AL008638.5-201ENST00000623814 1298 ntBASIC19.07■□□□□ 0.64
COL4A1P02462 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
COL4A1P02462 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
COL4A1P02462 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL4A1P02462 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL4A1P02462 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL4A1P02462 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC19.07■□□□□ 0.64
COL4A1P02462 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.07■□□□□ 0.64
COL4A1P02462 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC19.07■□□□□ 0.64
COL4A1P02462 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COL4A1P02462 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
COL4A1P02462 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC19.06■□□□□ 0.64
COL4A1P02462 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL4A1P02462 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL4A1P02462 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC19.06■□□□□ 0.64
COL4A1P02462 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC19.06■□□□□ 0.64
COL4A1P02462 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL4A1P02462 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL4A1P02462 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC19.06■□□□□ 0.64
COL4A1P02462 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC19.06■□□□□ 0.64
COL4A1P02462 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC19.06■□□□□ 0.64
COL4A1P02462 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL4A1P02462 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC19.06■□□□□ 0.64
COL4A1P02462 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL4A1P02462 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
COL4A1P02462 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COL4A1P02462 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL4A1P02462 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COL4A1P02462 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COL4A1P02462 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL4A1P02462 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL4A1P02462 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC19.05■□□□□ 0.64
COL4A1P02462 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.05■□□□□ 0.64
COL4A1P02462 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC19.05■□□□□ 0.64
COL4A1P02462 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
COL4A1P02462 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL4A1P02462 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC19.05■□□□□ 0.64
COL4A1P02462 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL4A1P02462 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
COL4A1P02462 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC19.05■□□□□ 0.64
COL4A1P02462 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC19.05■□□□□ 0.64
COL4A1P02462 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
COL4A1P02462 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC19.05■□□□□ 0.64
COL4A1P02462 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL4A1P02462 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC19.05■□□□□ 0.64
COL4A1P02462 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL4A1P02462 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
COL4A1P02462 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC19.05■□□□□ 0.64
COL4A1P02462 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC19.05■□□□□ 0.64
COL4A1P02462 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
COL4A1P02462 AC006453.4-201ENST00000636949 1252 ntBASIC19.05■□□□□ 0.64
COL4A1P02462 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL4A1P02462 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC19.05■□□□□ 0.64
COL4A1P02462 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC19.05■□□□□ 0.64
COL4A1P02462 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL4A1P02462 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
COL4A1P02462 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC19.05■□□□□ 0.64
COL4A1P02462 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
COL4A1P02462 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL4A1P02462 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL4A1P02462 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
COL4A1P02462 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL4A1P02462 AMT-224ENST00000635808 1610 ntTSL 5 BASIC19.05■□□□□ 0.64
COL4A1P02462 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL4A1P02462 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL4A1P02462 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
COL4A1P02462 AGER-203ENST00000375065 665 ntTSL 2 BASIC19.05■□□□□ 0.64
COL4A1P02462 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC19.05■□□□□ 0.64
COL4A1P02462 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC19.05■□□□□ 0.64
COL4A1P02462 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC19.05■□□□□ 0.64
COL4A1P02462 AC004466.1-201ENST00000599515 1080 ntBASIC19.05■□□□□ 0.64
COL4A1P02462 AC073413.1-201ENST00000603927 732 ntBASIC19.05■□□□□ 0.64
COL4A1P02462 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC19.04■□□□□ 0.64
COL4A1P02462 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL4A1P02462 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COL4A1P02462 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL4A1P02462 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
COL4A1P02462 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COL4A1P02462 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COL4A1P02462 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC19.04■□□□□ 0.64
COL4A1P02462 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL4A1P02462 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.04■□□□□ 0.64
COL4A1P02462 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
COL4A1P02462 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC19.04■□□□□ 0.64
COL4A1P02462 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL4A1P02462 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL4A1P02462 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COL4A1P02462 SUN1-204ENST00000403868 978 ntTSL 2 BASIC19.04■□□□□ 0.64
COL4A1P02462 POM121L8P-201ENST00000417732 1281 ntBASIC19.04■□□□□ 0.64
COL4A1P02462 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC19.04■□□□□ 0.64
COL4A1P02462 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC19.04■□□□□ 0.64
COL4A1P02462 POM121L9P-203ENST00000441984 1285 ntBASIC19.04■□□□□ 0.64
COL4A1P02462 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC19.04■□□□□ 0.64
COL4A1P02462 HSPB1P2-201ENST00000448722 546 ntBASIC19.04■□□□□ 0.64
COL4A1P02462 Z93015.1-201ENST00000451718 390 ntBASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms