Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
ABCA1O95477 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC13.4□□□□□ -0.26
ABCA1O95477 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
ABCA1O95477 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ABCA1O95477 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
ABCA1O95477 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ABCA1O95477 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
ABCA1O95477 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ABCA1O95477 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ABCA1O95477 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ABCA1O95477 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ABCA1O95477 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ABCA1O95477 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ABCA1O95477 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ABCA1O95477 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.4□□□□□ -0.26
ABCA1O95477 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.4□□□□□ -0.26
ABCA1O95477 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.4□□□□□ -0.26
ABCA1O95477 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.4□□□□□ -0.26
ABCA1O95477 AC124947.2-201ENST00000547118 1133 ntBASIC13.4□□□□□ -0.26
ABCA1O95477 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.4□□□□□ -0.26
ABCA1O95477 AC061975.2-201ENST00000581722 295 ntBASIC13.4□□□□□ -0.26
ABCA1O95477 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
ABCA1O95477 RPS15-212ENST00000593052 629 ntTSL 2 BASIC13.4□□□□□ -0.26
ABCA1O95477 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.4□□□□□ -0.26
ABCA1O95477 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.4□□□□□ -0.26
ABCA1O95477 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ABCA1O95477 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ABCA1O95477 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC13.4□□□□□ -0.26
ABCA1O95477 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ABCA1O95477 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ABCA1O95477 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC13.4□□□□□ -0.26
ABCA1O95477 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
ABCA1O95477 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC13.4□□□□□ -0.26
ABCA1O95477 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ABCA1O95477 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.4□□□□□ -0.26
ABCA1O95477 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
ABCA1O95477 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC13.4□□□□□ -0.26
ABCA1O95477 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ABCA1O95477 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
ABCA1O95477 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.4□□□□□ -0.26
ABCA1O95477 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ABCA1O95477 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.27
ABCA1O95477 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
ABCA1O95477 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
ABCA1O95477 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.39□□□□□ -0.27
ABCA1O95477 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.39□□□□□ -0.27
ABCA1O95477 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.39□□□□□ -0.27
ABCA1O95477 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.39□□□□□ -0.27
ABCA1O95477 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.39□□□□□ -0.27
ABCA1O95477 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.39□□□□□ -0.27
ABCA1O95477 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.39□□□□□ -0.27
ABCA1O95477 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.39□□□□□ -0.27
ABCA1O95477 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.39□□□□□ -0.27
ABCA1O95477 AC004461.2-201ENST00000629517 803 ntBASIC13.39□□□□□ -0.27
ABCA1O95477 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC13.39□□□□□ -0.27
ABCA1O95477 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ABCA1O95477 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ABCA1O95477 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
ABCA1O95477 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ABCA1O95477 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ABCA1O95477 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ABCA1O95477 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC13.39□□□□□ -0.27
ABCA1O95477 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.39□□□□□ -0.27
ABCA1O95477 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ABCA1O95477 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ABCA1O95477 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ABCA1O95477 CICP6-201ENST00000457191 2729 ntBASIC13.39□□□□□ -0.27
ABCA1O95477 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ABCA1O95477 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
ABCA1O95477 ACTBP11-201ENST00000436287 1126 ntBASIC13.39□□□□□ -0.27
ABCA1O95477 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC13.39□□□□□ -0.27
ABCA1O95477 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC13.39□□□□□ -0.27
ABCA1O95477 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.39□□□□□ -0.27
ABCA1O95477 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.39□□□□□ -0.27
ABCA1O95477 AC133552.6-201ENST00000613406 534 ntBASIC13.39□□□□□ -0.27
ABCA1O95477 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.39□□□□□ -0.27
ABCA1O95477 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC13.39□□□□□ -0.27
ABCA1O95477 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
ABCA1O95477 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
ABCA1O95477 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
ABCA1O95477 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
ABCA1O95477 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
ABCA1O95477 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ABCA1O95477 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ABCA1O95477 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC13.39□□□□□ -0.27
ABCA1O95477 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ABCA1O95477 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ABCA1O95477 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ABCA1O95477 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ABCA1O95477 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ABCA1O95477 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ABCA1O95477 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ABCA1O95477 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ABCA1O95477 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ABCA1O95477 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ABCA1O95477 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ABCA1O95477 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
ABCA1O95477 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ABCA1O95477 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
ABCA1O95477 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms