Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC6.93□□□□□ -1.3
USH2AO75445 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC6.93□□□□□ -1.3
USH2AO75445 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC6.93□□□□□ -1.3
USH2AO75445 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
USH2AO75445 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
USH2AO75445 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC6.93□□□□□ -1.3
USH2AO75445 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
USH2AO75445 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC6.93□□□□□ -1.3
USH2AO75445 KRT8P4-201ENST00000509735 1454 ntBASIC6.93□□□□□ -1.3
USH2AO75445 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC6.93□□□□□ -1.3
USH2AO75445 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
USH2AO75445 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
USH2AO75445 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
USH2AO75445 AC148477.4-201ENST00000613430 1793 ntBASIC6.93□□□□□ -1.3
USH2AO75445 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC6.93□□□□□ -1.3
USH2AO75445 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC6.93□□□□□ -1.3
USH2AO75445 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
USH2AO75445 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC6.93□□□□□ -1.3
USH2AO75445 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
USH2AO75445 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
USH2AO75445 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
USH2AO75445 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
USH2AO75445 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC6.93□□□□□ -1.3
USH2AO75445 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
USH2AO75445 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
USH2AO75445 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
USH2AO75445 AC011676.5-201ENST00000624864 2660 ntBASIC6.93□□□□□ -1.3
USH2AO75445 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
USH2AO75445 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC6.93□□□□□ -1.3
USH2AO75445 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
USH2AO75445 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
USH2AO75445 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
USH2AO75445 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
USH2AO75445 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC6.93□□□□□ -1.3
USH2AO75445 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
USH2AO75445 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
USH2AO75445 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
USH2AO75445 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
USH2AO75445 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
USH2AO75445 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
USH2AO75445 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC6.93□□□□□ -1.3
USH2AO75445 HLA-A-202ENST00000376806 1854 ntBASIC6.93□□□□□ -1.3
USH2AO75445 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
USH2AO75445 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC6.93□□□□□ -1.3
USH2AO75445 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC6.93□□□□□ -1.3
USH2AO75445 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC6.93□□□□□ -1.3
USH2AO75445 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC6.93□□□□□ -1.3
USH2AO75445 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC6.93□□□□□ -1.3
USH2AO75445 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
USH2AO75445 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC6.93□□□□□ -1.3
USH2AO75445 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
USH2AO75445 BX323043.1-201ENST00000641006 1765 ntBASIC6.93□□□□□ -1.3
USH2AO75445 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC6.93□□□□□ -1.3
USH2AO75445 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
USH2AO75445 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
USH2AO75445 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
USH2AO75445 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
USH2AO75445 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
USH2AO75445 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC6.93□□□□□ -1.3
USH2AO75445 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
USH2AO75445 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
USH2AO75445 AL627231.1-201ENST00000394467 1125 ntBASIC6.93□□□□□ -1.3
USH2AO75445 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC6.93□□□□□ -1.3
USH2AO75445 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC6.93□□□□□ -1.3
USH2AO75445 PTPN20CP-201ENST00000614090 920 ntBASIC6.93□□□□□ -1.3
USH2AO75445 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
USH2AO75445 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC6.92□□□□□ -1.3
USH2AO75445 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
USH2AO75445 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
USH2AO75445 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
USH2AO75445 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
USH2AO75445 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
USH2AO75445 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
USH2AO75445 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
USH2AO75445 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
USH2AO75445 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
USH2AO75445 JPT2-203ENST00000382711 894 ntTSL 4 BASIC6.92□□□□□ -1.3
USH2AO75445 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC6.92□□□□□ -1.3
USH2AO75445 RNMTL1P1-201ENST00000454103 560 ntBASIC6.92□□□□□ -1.3
USH2AO75445 IGHEP1-201ENST00000521393 651 ntBASIC6.92□□□□□ -1.3
USH2AO75445 AC005041.3-201ENST00000606287 649 ntBASIC6.92□□□□□ -1.3
USH2AO75445 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC6.92□□□□□ -1.3
USH2AO75445 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC6.92□□□□□ -1.3
USH2AO75445 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
USH2AO75445 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC6.92□□□□□ -1.3
USH2AO75445 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC6.92□□□□□ -1.3
USH2AO75445 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
USH2AO75445 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
USH2AO75445 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
USH2AO75445 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
USH2AO75445 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
USH2AO75445 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
USH2AO75445 AL391256.1-201ENST00000443260 1855 ntBASIC6.92□□□□□ -1.3
USH2AO75445 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
USH2AO75445 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC6.92□□□□□ -1.3
USH2AO75445 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
USH2AO75445 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
USH2AO75445 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC6.92□□□□□ -1.3
USH2AO75445 RPL8P2-201ENST00000430538 502 ntBASIC6.92□□□□□ -1.3
USH2AO75445 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms