Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
TRIM3O75382 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM3O75382 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TRIM3O75382 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.93□□□□□ -0.02
TRIM3O75382 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.93□□□□□ -0.02
TRIM3O75382 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.93□□□□□ -0.02
TRIM3O75382 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.93□□□□□ -0.02
TRIM3O75382 AC018529.1-201ENST00000613063 361 ntBASIC14.93□□□□□ -0.02
TRIM3O75382 MIR6080-201ENST00000617359 66 ntBASIC14.93□□□□□ -0.02
TRIM3O75382 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.93□□□□□ -0.02
TRIM3O75382 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
TRIM3O75382 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TRIM3O75382 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
TRIM3O75382 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM3O75382 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM3O75382 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM3O75382 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.93□□□□□ -0.02
TRIM3O75382 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM3O75382 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
TRIM3O75382 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.93□□□□□ -0.02
TRIM3O75382 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM3O75382 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM3O75382 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
TRIM3O75382 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
TRIM3O75382 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM3O75382 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
TRIM3O75382 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.92□□□□□ -0.02
TRIM3O75382 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TRIM3O75382 AL589702.1-201ENST00000641229 1509 ntBASIC14.92□□□□□ -0.02
TRIM3O75382 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM3O75382 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM3O75382 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TRIM3O75382 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM3O75382 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM3O75382 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.92□□□□□ -0.02
TRIM3O75382 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.92□□□□□ -0.02
TRIM3O75382 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.92□□□□□ -0.02
TRIM3O75382 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM3O75382 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM3O75382 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
TRIM3O75382 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM3O75382 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM3O75382 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.92□□□□□ -0.02
TRIM3O75382 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM3O75382 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.92□□□□□ -0.02
TRIM3O75382 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM3O75382 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.92□□□□□ -0.02
TRIM3O75382 KLF2P3-201ENST00000451977 1087 ntBASIC14.92□□□□□ -0.02
TRIM3O75382 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
TRIM3O75382 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.92□□□□□ -0.02
TRIM3O75382 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.92□□□□□ -0.02
TRIM3O75382 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.92□□□□□ -0.02
TRIM3O75382 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM3O75382 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.92□□□□□ -0.02
TRIM3O75382 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.92□□□□□ -0.02
TRIM3O75382 AC093512.1-201ENST00000617969 520 ntBASIC14.92□□□□□ -0.02
TRIM3O75382 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM3O75382 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM3O75382 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
TRIM3O75382 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM3O75382 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.92□□□□□ -0.02
TRIM3O75382 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.92□□□□□ -0.02
TRIM3O75382 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
TRIM3O75382 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM3O75382 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
TRIM3O75382 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM3O75382 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
TRIM3O75382 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.92□□□□□ -0.02
TRIM3O75382 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM3O75382 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM3O75382 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM3O75382 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TRIM3O75382 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM3O75382 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM3O75382 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM3O75382 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
TRIM3O75382 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM3O75382 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TRIM3O75382 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TRIM3O75382 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
TRIM3O75382 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.91□□□□□ -0.02
TRIM3O75382 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM3O75382 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM3O75382 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM3O75382 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM3O75382 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.91□□□□□ -0.02
TRIM3O75382 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.91□□□□□ -0.02
TRIM3O75382 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
TRIM3O75382 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
TRIM3O75382 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.91□□□□□ -0.02
TRIM3O75382 POU5F1P6-201ENST00000466990 990 ntBASIC14.91□□□□□ -0.02
TRIM3O75382 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM3O75382 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM3O75382 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM3O75382 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.91□□□□□ -0.02
TRIM3O75382 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM3O75382 MIR4453-201ENST00000584019 89 ntBASIC14.91□□□□□ -0.02
TRIM3O75382 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM3O75382 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM3O75382 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms