Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF40O75150 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF40O75150 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
RNF40O75150 PMS2P4-201ENST00000412466 1052 ntBASIC17.28■□□□□ 0.36
RNF40O75150 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.28■□□□□ 0.36
RNF40O75150 FAM58DP-201ENST00000428076 619 ntBASIC17.28■□□□□ 0.36
RNF40O75150 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.28■□□□□ 0.36
RNF40O75150 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF40O75150 AC069335.1-201ENST00000489972 472 ntBASIC17.28■□□□□ 0.36
RNF40O75150 RNA5SP421-201ENST00000516864 134 ntBASIC17.28■□□□□ 0.36
RNF40O75150 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.28■□□□□ 0.36
RNF40O75150 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF40O75150 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.28■□□□□ 0.36
RNF40O75150 DUX4L17-201ENST00000557360 1267 ntBASIC17.28■□□□□ 0.36
RNF40O75150 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.28■□□□□ 0.36
RNF40O75150 AJ011932.1-201ENST00000621707 465 ntBASIC17.28■□□□□ 0.36
RNF40O75150 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.28■□□□□ 0.36
RNF40O75150 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF40O75150 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF40O75150 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.28■□□□□ 0.36
RNF40O75150 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF40O75150 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.28■□□□□ 0.36
RNF40O75150 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF40O75150 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RNF40O75150 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF40O75150 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF40O75150 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF40O75150 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF40O75150 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF40O75150 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RNF40O75150 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF40O75150 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.28■□□□□ 0.36
RNF40O75150 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF40O75150 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF40O75150 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF40O75150 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF40O75150 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
RNF40O75150 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RNF40O75150 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RNF40O75150 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF40O75150 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF40O75150 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RNF40O75150 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF40O75150 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RNF40O75150 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RNF40O75150 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF40O75150 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
RNF40O75150 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF40O75150 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
RNF40O75150 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF40O75150 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF40O75150 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.27■□□□□ 0.36
RNF40O75150 MTND2P7-201ENST00000521337 640 ntBASIC17.27■□□□□ 0.36
RNF40O75150 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.27■□□□□ 0.36
RNF40O75150 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF40O75150 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF40O75150 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RNF40O75150 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF40O75150 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF40O75150 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF40O75150 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RNF40O75150 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF40O75150 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RNF40O75150 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF40O75150 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
RNF40O75150 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF40O75150 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC17.27■□□□□ 0.35
RNF40O75150 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF40O75150 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF40O75150 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC17.27■□□□□ 0.35
RNF40O75150 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
RNF40O75150 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF40O75150 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF40O75150 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF40O75150 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RNF40O75150 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.27■□□□□ 0.35
RNF40O75150 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
RNF40O75150 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF40O75150 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RNF40O75150 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
RNF40O75150 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF40O75150 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RNF40O75150 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF40O75150 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.26■□□□□ 0.35
RNF40O75150 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
RNF40O75150 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF40O75150 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF40O75150 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF40O75150 AKAP8P1-201ENST00000434743 1349 ntBASIC17.26■□□□□ 0.35
RNF40O75150 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.26■□□□□ 0.35
RNF40O75150 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF40O75150 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF40O75150 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
RNF40O75150 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF40O75150 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF40O75150 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF40O75150 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF40O75150 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.26■□□□□ 0.35
RNF40O75150 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
RNF40O75150 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms