Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
OPHN1O60890 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
OPHN1O60890 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
OPHN1O60890 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
OPHN1O60890 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
OPHN1O60890 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
OPHN1O60890 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
OPHN1O60890 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
OPHN1O60890 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
OPHN1O60890 TREML5P-201ENST00000421694 576 ntBASIC16.72■□□□□ 0.27
OPHN1O60890 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.72■□□□□ 0.27
OPHN1O60890 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.72■□□□□ 0.27
OPHN1O60890 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.72■□□□□ 0.27
OPHN1O60890 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.72■□□□□ 0.27
OPHN1O60890 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.72■□□□□ 0.27
OPHN1O60890 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.72■□□□□ 0.27
OPHN1O60890 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.72■□□□□ 0.27
OPHN1O60890 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
OPHN1O60890 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.72■□□□□ 0.27
OPHN1O60890 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
OPHN1O60890 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
OPHN1O60890 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
OPHN1O60890 FO538757.1-201ENST00000623083 1397 ntBASIC16.72■□□□□ 0.27
OPHN1O60890 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
OPHN1O60890 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
OPHN1O60890 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
OPHN1O60890 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
OPHN1O60890 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
OPHN1O60890 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.72■□□□□ 0.27
OPHN1O60890 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
OPHN1O60890 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
OPHN1O60890 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.72■□□□□ 0.27
OPHN1O60890 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.72■□□□□ 0.27
OPHN1O60890 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
OPHN1O60890 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
OPHN1O60890 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
OPHN1O60890 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
OPHN1O60890 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
OPHN1O60890 AC067930.6-201ENST00000623257 4947 ntBASIC16.71■□□□□ 0.27
OPHN1O60890 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
OPHN1O60890 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
OPHN1O60890 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
OPHN1O60890 MIR600HG-201ENST00000449175 5984 ntBASIC16.71■□□□□ 0.27
OPHN1O60890 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.71■□□□□ 0.27
OPHN1O60890 CDC14C-201ENST00000428251 1719 ntBASIC16.71■□□□□ 0.27
OPHN1O60890 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
OPHN1O60890 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
OPHN1O60890 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.71■□□□□ 0.27
OPHN1O60890 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
OPHN1O60890 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
OPHN1O60890 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
OPHN1O60890 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
OPHN1O60890 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
OPHN1O60890 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
OPHN1O60890 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.71■□□□□ 0.27
OPHN1O60890 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.71■□□□□ 0.27
OPHN1O60890 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
OPHN1O60890 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.71■□□□□ 0.27
OPHN1O60890 UGT1A2P-201ENST00000454886 866 ntBASIC16.71■□□□□ 0.27
OPHN1O60890 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
OPHN1O60890 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
OPHN1O60890 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
OPHN1O60890 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.71■□□□□ 0.27
OPHN1O60890 AC027307.3-201ENST00000594262 1100 ntBASIC16.71■□□□□ 0.27
OPHN1O60890 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
OPHN1O60890 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.71■□□□□ 0.27
OPHN1O60890 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
OPHN1O60890 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
OPHN1O60890 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
OPHN1O60890 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.71■□□□□ 0.27
OPHN1O60890 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
OPHN1O60890 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.71■□□□□ 0.27
OPHN1O60890 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
OPHN1O60890 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
OPHN1O60890 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
OPHN1O60890 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
OPHN1O60890 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
OPHN1O60890 AC010491.1-201ENST00000563101 2797 ntBASIC16.71■□□□□ 0.26
OPHN1O60890 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.26
OPHN1O60890 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
OPHN1O60890 WASH6P-202ENST00000359512 1437 ntBASIC16.7■□□□□ 0.26
OPHN1O60890 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.7■□□□□ 0.26
OPHN1O60890 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.7■□□□□ 0.26
OPHN1O60890 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
OPHN1O60890 UXT-AS1-201ENST00000590504 1525 ntBASIC16.7■□□□□ 0.26
OPHN1O60890 AC069224.1-201ENST00000566372 1715 ntBASIC16.7■□□□□ 0.26
OPHN1O60890 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
OPHN1O60890 LINC02447-202ENST00000501888 2146 ntBASIC16.7■□□□□ 0.26
OPHN1O60890 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.7■□□□□ 0.26
OPHN1O60890 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.7■□□□□ 0.26
OPHN1O60890 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
OPHN1O60890 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
OPHN1O60890 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
OPHN1O60890 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.7■□□□□ 0.26
OPHN1O60890 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
OPHN1O60890 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.7■□□□□ 0.26
OPHN1O60890 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
OPHN1O60890 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
OPHN1O60890 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.7■□□□□ 0.26
OPHN1O60890 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms