Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ACTN4O43707 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ACTN4O43707 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ACTN4O43707 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ACTN4O43707 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ACTN4O43707 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.87■□□□□ 0.45
ACTN4O43707 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.87■□□□□ 0.45
ACTN4O43707 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ACTN4O43707 C18orf15-201ENST00000623680 2534 ntBASIC17.87■□□□□ 0.45
ACTN4O43707 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.87■□□□□ 0.45
ACTN4O43707 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ACTN4O43707 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.87■□□□□ 0.45
ACTN4O43707 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
ACTN4O43707 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.87■□□□□ 0.45
ACTN4O43707 PHKG1P2-201ENST00000457537 863 ntBASIC17.87■□□□□ 0.45
ACTN4O43707 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.87■□□□□ 0.45
ACTN4O43707 YBX1P5-201ENST00000509441 847 ntBASIC17.87■□□□□ 0.45
ACTN4O43707 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.87■□□□□ 0.45
ACTN4O43707 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.87■□□□□ 0.45
ACTN4O43707 HNRNPUP1-201ENST00000554987 333 ntBASIC17.87■□□□□ 0.45
ACTN4O43707 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.87■□□□□ 0.45
ACTN4O43707 AL513210.1-201ENST00000629608 234 ntBASIC17.87■□□□□ 0.45
ACTN4O43707 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
ACTN4O43707 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
ACTN4O43707 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ACTN4O43707 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ACTN4O43707 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
ACTN4O43707 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ACTN4O43707 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ACTN4O43707 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
ACTN4O43707 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.87■□□□□ 0.45
ACTN4O43707 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
ACTN4O43707 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ACTN4O43707 AC006058.4-201ENST00000624016 1670 ntBASIC17.87■□□□□ 0.45
ACTN4O43707 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.86■□□□□ 0.45
ACTN4O43707 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
ACTN4O43707 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ACTN4O43707 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ACTN4O43707 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.86■□□□□ 0.45
ACTN4O43707 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.86■□□□□ 0.45
ACTN4O43707 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ACTN4O43707 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ACTN4O43707 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ACTN4O43707 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ACTN4O43707 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ACTN4O43707 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ACTN4O43707 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.86■□□□□ 0.45
ACTN4O43707 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.86■□□□□ 0.45
ACTN4O43707 CEND1P1-201ENST00000451006 455 ntBASIC17.86■□□□□ 0.45
ACTN4O43707 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.86■□□□□ 0.45
ACTN4O43707 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.86■□□□□ 0.45
ACTN4O43707 AC055717.3-201ENST00000622967 595 ntBASIC17.86■□□□□ 0.45
ACTN4O43707 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ACTN4O43707 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ACTN4O43707 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
ACTN4O43707 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ACTN4O43707 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ACTN4O43707 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ACTN4O43707 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ACTN4O43707 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ACTN4O43707 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.86■□□□□ 0.45
ACTN4O43707 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
ACTN4O43707 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
ACTN4O43707 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC17.86■□□□□ 0.45
ACTN4O43707 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ACTN4O43707 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ACTN4O43707 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ACTN4O43707 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC17.86■□□□□ 0.45
ACTN4O43707 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ACTN4O43707 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ACTN4O43707 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ACTN4O43707 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ACTN4O43707 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ACTN4O43707 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ACTN4O43707 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ACTN4O43707 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ACTN4O43707 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
ACTN4O43707 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ACTN4O43707 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.85■□□□□ 0.45
ACTN4O43707 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
ACTN4O43707 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ACTN4O43707 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.85■□□□□ 0.45
ACTN4O43707 GPS2P2-201ENST00000430745 888 ntBASIC17.85■□□□□ 0.45
ACTN4O43707 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ACTN4O43707 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ACTN4O43707 STK33-217ENST00000534493 1895 ntTSL 2 BASIC17.85■□□□□ 0.45
ACTN4O43707 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.85■□□□□ 0.45
ACTN4O43707 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC17.85■□□□□ 0.45
ACTN4O43707 AC005829.1-201ENST00000570002 483 ntBASIC17.85■□□□□ 0.45
ACTN4O43707 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ACTN4O43707 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.85■□□□□ 0.45
ACTN4O43707 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ACTN4O43707 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.85■□□□□ 0.45
ACTN4O43707 AC023824.1-201ENST00000562945 2975 ntBASIC17.85■□□□□ 0.45
ACTN4O43707 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ACTN4O43707 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC17.85■□□□□ 0.45
ACTN4O43707 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
ACTN4O43707 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
ACTN4O43707 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ACTN4O43707 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms