Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TNRC18O15417 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.74■□□□□ 0.27
TNRC18O15417 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TNRC18O15417 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TNRC18O15417 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.74■□□□□ 0.27
TNRC18O15417 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TNRC18O15417 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TNRC18O15417 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TNRC18O15417 AC114812.1-204ENST00000449669 728 ntBASIC16.74■□□□□ 0.27
TNRC18O15417 CISD2-202ENST00000503643 808 ntTSL 2 BASIC16.74■□□□□ 0.27
TNRC18O15417 NEU3-207ENST00000534628 746 ntTSL 2 BASIC16.74■□□□□ 0.27
TNRC18O15417 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC16.74■□□□□ 0.27
TNRC18O15417 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC16.74■□□□□ 0.27
TNRC18O15417 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TNRC18O15417 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.74■□□□□ 0.27
TNRC18O15417 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TNRC18O15417 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TNRC18O15417 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TNRC18O15417 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.74■□□□□ 0.27
TNRC18O15417 FAU-201ENST00000279259 461 ntTSL 2 BASIC16.74■□□□□ 0.27
TNRC18O15417 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC16.74■□□□□ 0.27
TNRC18O15417 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TNRC18O15417 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC16.74■□□□□ 0.27
TNRC18O15417 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC16.74■□□□□ 0.27
TNRC18O15417 MIEF1-215ENST00000637854 213 ntBASIC16.74■□□□□ 0.27
TNRC18O15417 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TNRC18O15417 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TNRC18O15417 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC16.74■□□□□ 0.27
TNRC18O15417 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TNRC18O15417 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
TNRC18O15417 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TNRC18O15417 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TNRC18O15417 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TNRC18O15417 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TNRC18O15417 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TNRC18O15417 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TNRC18O15417 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.73■□□□□ 0.27
TNRC18O15417 SURF4-203ENST00000371991 715 ntTSL 3 BASIC16.73■□□□□ 0.27
TNRC18O15417 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC16.73■□□□□ 0.27
TNRC18O15417 AC092612.1-201ENST00000514501 998 ntBASIC16.73■□□□□ 0.27
TNRC18O15417 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TNRC18O15417 AC120498.5-201ENST00000561757 299 ntBASIC16.73■□□□□ 0.27
TNRC18O15417 NAV1-210ENST00000593583 726 ntBASIC16.73■□□□□ 0.27
TNRC18O15417 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC16.73■□□□□ 0.27
TNRC18O15417 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
TNRC18O15417 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.73■□□□□ 0.27
TNRC18O15417 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TNRC18O15417 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.73■□□□□ 0.27
TNRC18O15417 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TNRC18O15417 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TNRC18O15417 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC16.73■□□□□ 0.27
TNRC18O15417 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
TNRC18O15417 AL157813.1-201ENST00000612996 587 ntBASIC16.73■□□□□ 0.27
TNRC18O15417 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.73■□□□□ 0.27
TNRC18O15417 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TNRC18O15417 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TNRC18O15417 KDF1-202ENST00000616918 1651 ntTSL 2 BASIC16.73■□□□□ 0.27
TNRC18O15417 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
TNRC18O15417 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC16.72■□□□□ 0.27
TNRC18O15417 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TNRC18O15417 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TNRC18O15417 AC245100.5-201ENST00000452108 331 ntBASIC16.72■□□□□ 0.27
TNRC18O15417 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TNRC18O15417 AC087392.5-201ENST00000612517 489 ntBASIC16.72■□□□□ 0.27
TNRC18O15417 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TNRC18O15417 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.72■□□□□ 0.27
TNRC18O15417 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TNRC18O15417 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.72■□□□□ 0.27
TNRC18O15417 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC16.72■□□□□ 0.27
TNRC18O15417 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TNRC18O15417 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC16.72■□□□□ 0.27
TNRC18O15417 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TNRC18O15417 CASP2-203ENST00000392925 616 ntTSL 3 BASIC16.72■□□□□ 0.27
TNRC18O15417 FAM197Y6-201ENST00000420524 766 ntBASIC16.72■□□□□ 0.27
TNRC18O15417 AL929302.1-201ENST00000426556 871 ntBASIC16.72■□□□□ 0.27
TNRC18O15417 AP000358.1-201ENST00000456260 156 ntBASIC16.72■□□□□ 0.27
TNRC18O15417 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TNRC18O15417 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TNRC18O15417 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TNRC18O15417 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.72■□□□□ 0.27
TNRC18O15417 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TNRC18O15417 AL109809.1-201ENST00000418979 1367 ntBASIC16.71■□□□□ 0.27
TNRC18O15417 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.71■□□□□ 0.27
TNRC18O15417 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC16.71■□□□□ 0.27
TNRC18O15417 DKKL1P1-201ENST00000400550 698 ntBASIC16.71■□□□□ 0.27
TNRC18O15417 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.71■□□□□ 0.27
TNRC18O15417 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TNRC18O15417 ORAOV1P1-201ENST00000503108 395 ntBASIC16.71■□□□□ 0.27
TNRC18O15417 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC16.71■□□□□ 0.27
TNRC18O15417 AC124068.2-201ENST00000569473 1109 ntBASIC16.71■□□□□ 0.27
TNRC18O15417 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TNRC18O15417 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TNRC18O15417 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TNRC18O15417 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TNRC18O15417 MBLAC2-202ENST00000514906 1936 ntBASIC16.71■□□□□ 0.27
TNRC18O15417 NME4-203ENST00000397722 1232 ntTSL 2 BASIC16.71■□□□□ 0.27
TNRC18O15417 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
TNRC18O15417 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TNRC18O15417 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TNRC18O15417 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms