Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXN1O15353 ZBTB12BP-201ENST00000314232 1122 ntBASIC18.96■□□□□ 0.63
FOXN1O15353 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
FOXN1O15353 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXN1O15353 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
FOXN1O15353 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
FOXN1O15353 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC18.96■□□□□ 0.63
FOXN1O15353 OLR1-203ENST00000432556 950 ntTSL 2 BASIC18.96■□□□□ 0.63
FOXN1O15353 RHOA-206ENST00000454011 889 ntTSL 2 BASIC18.96■□□□□ 0.63
FOXN1O15353 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC18.96■□□□□ 0.63
FOXN1O15353 MIR4750-201ENST00000584564 56 ntBASIC18.96■□□□□ 0.63
FOXN1O15353 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC18.96■□□□□ 0.63
FOXN1O15353 HLA-C-210ENST00000640219 976 ntBASIC18.96■□□□□ 0.63
FOXN1O15353 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXN1O15353 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.96■□□□□ 0.63
FOXN1O15353 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXN1O15353 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC18.96■□□□□ 0.63
FOXN1O15353 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
FOXN1O15353 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
FOXN1O15353 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXN1O15353 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.96■□□□□ 0.63
FOXN1O15353 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.96■□□□□ 0.63
FOXN1O15353 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXN1O15353 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
FOXN1O15353 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXN1O15353 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXN1O15353 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
FOXN1O15353 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
FOXN1O15353 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
FOXN1O15353 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
FOXN1O15353 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC18.95■□□□□ 0.62
FOXN1O15353 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
FOXN1O15353 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
FOXN1O15353 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC18.95■□□□□ 0.62
FOXN1O15353 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.95■□□□□ 0.62
FOXN1O15353 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
FOXN1O15353 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
FOXN1O15353 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
FOXN1O15353 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC18.95■□□□□ 0.62
FOXN1O15353 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC18.95■□□□□ 0.62
FOXN1O15353 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.95■□□□□ 0.62
FOXN1O15353 AP002490.2-201ENST00000524791 560 ntBASIC18.95■□□□□ 0.62
FOXN1O15353 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC18.95■□□□□ 0.62
FOXN1O15353 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC18.95■□□□□ 0.62
FOXN1O15353 RARRES2P5-201ENST00000564013 466 ntBASIC18.95■□□□□ 0.62
FOXN1O15353 PRKN-211ENST00000615065 261 ntTSL 5 BASIC18.95■□□□□ 0.62
FOXN1O15353 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
FOXN1O15353 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
FOXN1O15353 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
FOXN1O15353 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
FOXN1O15353 BANP-204ENST00000393208 2283 ntTSL 2 BASIC18.95■□□□□ 0.62
FOXN1O15353 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
FOXN1O15353 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC18.95■□□□□ 0.62
FOXN1O15353 AC006277.1-201ENST00000624348 1610 ntBASIC18.95■□□□□ 0.62
FOXN1O15353 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
FOXN1O15353 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
FOXN1O15353 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
FOXN1O15353 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
FOXN1O15353 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.95■□□□□ 0.62
FOXN1O15353 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
FOXN1O15353 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
FOXN1O15353 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
FOXN1O15353 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
FOXN1O15353 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.95■□□□□ 0.62
FOXN1O15353 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
FOXN1O15353 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC18.95■□□□□ 0.62
FOXN1O15353 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
FOXN1O15353 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
FOXN1O15353 KRT8P12-202ENST00000472924 1397 ntBASIC18.94■□□□□ 0.62
FOXN1O15353 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
FOXN1O15353 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
FOXN1O15353 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
FOXN1O15353 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.94■□□□□ 0.62
FOXN1O15353 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
FOXN1O15353 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.94■□□□□ 0.62
FOXN1O15353 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
FOXN1O15353 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
FOXN1O15353 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
FOXN1O15353 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
FOXN1O15353 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
FOXN1O15353 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC18.94■□□□□ 0.62
FOXN1O15353 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC18.94■□□□□ 0.62
FOXN1O15353 REEP1-202ENST00000453231 940 ntTSL 2 BASIC18.94■□□□□ 0.62
FOXN1O15353 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
FOXN1O15353 HIST2H2BC-201ENST00000498492 580 ntBASIC18.94■□□□□ 0.62
FOXN1O15353 AC098859.1-201ENST00000502915 1238 ntBASIC18.94■□□□□ 0.62
FOXN1O15353 HNRNPA1P13-201ENST00000510646 963 ntBASIC18.94■□□□□ 0.62
FOXN1O15353 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
FOXN1O15353 AC079316.1-201ENST00000548397 411 ntBASIC18.94■□□□□ 0.62
FOXN1O15353 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC18.94■□□□□ 0.62
FOXN1O15353 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC18.94■□□□□ 0.62
FOXN1O15353 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC18.94■□□□□ 0.62
FOXN1O15353 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.94■□□□□ 0.62
FOXN1O15353 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC18.94■□□□□ 0.62
FOXN1O15353 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC18.94■□□□□ 0.62
FOXN1O15353 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.94■□□□□ 0.62
FOXN1O15353 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC18.94■□□□□ 0.62
FOXN1O15353 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC18.94■□□□□ 0.62
FOXN1O15353 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
FOXN1O15353 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms