Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.26■□□□□ 0.03
PCDH17O14917 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.26■□□□□ 0.03
PCDH17O14917 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH17O14917 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PCDH17O14917 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.26■□□□□ 0.03
PCDH17O14917 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH17O14917 TREML5P-201ENST00000421694 576 ntBASIC15.26■□□□□ 0.03
PCDH17O14917 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.26■□□□□ 0.03
PCDH17O14917 FAM207CP-201ENST00000443486 507 ntBASIC15.26■□□□□ 0.03
PCDH17O14917 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.26■□□□□ 0.03
PCDH17O14917 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PCDH17O14917 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PCDH17O14917 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH17O14917 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.26■□□□□ 0.03
PCDH17O14917 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.26■□□□□ 0.03
PCDH17O14917 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
PCDH17O14917 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.26■□□□□ 0.03
PCDH17O14917 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.26■□□□□ 0.03
PCDH17O14917 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH17O14917 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH17O14917 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
PCDH17O14917 CETN4P-206ENST00000642099 2168 ntBASIC15.26■□□□□ 0.03
PCDH17O14917 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.26■□□□□ 0.03
PCDH17O14917 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH17O14917 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH17O14917 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH17O14917 AC112504.1-201ENST00000623415 1841 ntBASIC15.26■□□□□ 0.03
PCDH17O14917 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
PCDH17O14917 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH17O14917 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH17O14917 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH17O14917 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH17O14917 CDC14C-201ENST00000428251 1719 ntBASIC15.26■□□□□ 0.03
PCDH17O14917 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.26■□□□□ 0.03
PCDH17O14917 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDH17O14917 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDH17O14917 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCDH17O14917 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDH17O14917 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.25■□□□□ 0.03
PCDH17O14917 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.25■□□□□ 0.03
PCDH17O14917 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCDH17O14917 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCDH17O14917 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.25■□□□□ 0.03
PCDH17O14917 LINC02447-202ENST00000501888 2146 ntBASIC15.25■□□□□ 0.03
PCDH17O14917 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCDH17O14917 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDH17O14917 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
PCDH17O14917 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDH17O14917 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDH17O14917 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDH17O14917 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.25■□□□□ 0.03
PCDH17O14917 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDH17O14917 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
PCDH17O14917 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.25■□□□□ 0.03
PCDH17O14917 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.25■□□□□ 0.03
PCDH17O14917 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.25■□□□□ 0.03
PCDH17O14917 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.25■□□□□ 0.03
PCDH17O14917 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.25■□□□□ 0.03
PCDH17O14917 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.25■□□□□ 0.03
PCDH17O14917 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDH17O14917 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.25■□□□□ 0.03
PCDH17O14917 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.25■□□□□ 0.03
PCDH17O14917 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PCDH17O14917 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDH17O14917 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.25■□□□□ 0.03
PCDH17O14917 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDH17O14917 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDH17O14917 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDH17O14917 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.25■□□□□ 0.03
PCDH17O14917 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDH17O14917 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.25■□□□□ 0.03
PCDH17O14917 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCDH17O14917 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDH17O14917 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PCDH17O14917 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDH17O14917 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDH17O14917 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
PCDH17O14917 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH17O14917 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH17O14917 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH17O14917 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.24■□□□□ 0.03
PCDH17O14917 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
PCDH17O14917 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.24■□□□□ 0.03
PCDH17O14917 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH17O14917 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH17O14917 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.24■□□□□ 0.03
PCDH17O14917 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDH17O14917 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH17O14917 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH17O14917 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH17O14917 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.24■□□□□ 0.03
PCDH17O14917 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDH17O14917 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.24■□□□□ 0.03
PCDH17O14917 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
PCDH17O14917 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH17O14917 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.24■□□□□ 0.03
PCDH17O14917 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH17O14917 AC105021.1-202ENST00000570572 669 ntBASIC15.24■□□□□ 0.03
PCDH17O14917 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDH17O14917 AC061975.2-201ENST00000581722 295 ntBASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms