Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN9O14815 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN9O14815 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN9O14815 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CAPN9O14815 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN9O14815 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN9O14815 AC024909.3-201ENST00000611513 2257 ntBASIC16.89■□□□□ 0.29
CAPN9O14815 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN9O14815 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN9O14815 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN9O14815 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN9O14815 MIR770-201ENST00000390219 98 ntBASIC16.89■□□□□ 0.29
CAPN9O14815 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.89■□□□□ 0.29
CAPN9O14815 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.89■□□□□ 0.29
CAPN9O14815 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN9O14815 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN9O14815 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CAPN9O14815 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.89■□□□□ 0.29
CAPN9O14815 AC015911.4-201ENST00000588022 1070 ntBASIC16.89■□□□□ 0.29
CAPN9O14815 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.89■□□□□ 0.29
CAPN9O14815 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.89■□□□□ 0.29
CAPN9O14815 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
CAPN9O14815 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.89■□□□□ 0.29
CAPN9O14815 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CAPN9O14815 NORAD-201ENST00000565493 5339 ntBASIC16.89■□□□□ 0.29
CAPN9O14815 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN9O14815 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN9O14815 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN9O14815 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN9O14815 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN9O14815 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN9O14815 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
CAPN9O14815 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CAPN9O14815 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN9O14815 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CAPN9O14815 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.88■□□□□ 0.29
CAPN9O14815 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.88■□□□□ 0.29
CAPN9O14815 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN9O14815 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.88■□□□□ 0.29
CAPN9O14815 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
CAPN9O14815 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
CAPN9O14815 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN9O14815 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN9O14815 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN9O14815 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN9O14815 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN9O14815 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.88■□□□□ 0.29
CAPN9O14815 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN9O14815 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN9O14815 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN9O14815 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.88■□□□□ 0.29
CAPN9O14815 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.88■□□□□ 0.29
CAPN9O14815 AC107890.1-201ENST00000422478 521 ntBASIC16.88■□□□□ 0.29
CAPN9O14815 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.88■□□□□ 0.29
CAPN9O14815 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN9O14815 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.88■□□□□ 0.29
CAPN9O14815 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN9O14815 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN9O14815 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.88■□□□□ 0.29
CAPN9O14815 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN9O14815 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.88■□□□□ 0.29
CAPN9O14815 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.88■□□□□ 0.29
CAPN9O14815 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.88■□□□□ 0.29
CAPN9O14815 AC243562.2-201ENST00000561247 970 ntBASIC16.88■□□□□ 0.29
CAPN9O14815 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.88■□□□□ 0.29
CAPN9O14815 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
CAPN9O14815 RN7SL828P-201ENST00000607615 303 ntBASIC16.88■□□□□ 0.29
CAPN9O14815 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.88■□□□□ 0.29
CAPN9O14815 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN9O14815 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.88■□□□□ 0.29
CAPN9O14815 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN9O14815 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN9O14815 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN9O14815 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.88■□□□□ 0.29
CAPN9O14815 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN9O14815 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN9O14815 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CAPN9O14815 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN9O14815 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN9O14815 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN9O14815 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN9O14815 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN9O14815 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CAPN9O14815 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CAPN9O14815 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.87■□□□□ 0.29
CAPN9O14815 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CAPN9O14815 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.87■□□□□ 0.29
CAPN9O14815 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CAPN9O14815 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.87■□□□□ 0.29
CAPN9O14815 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CAPN9O14815 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
CAPN9O14815 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CAPN9O14815 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
CAPN9O14815 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CAPN9O14815 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CAPN9O14815 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CAPN9O14815 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CAPN9O14815 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.87■□□□□ 0.29
CAPN9O14815 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CAPN9O14815 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms