Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC20.26■□□□□ 0.83
CHL1O00533 AC092127.1-201ENST00000567093 3455 ntBASIC20.26■□□□□ 0.83
CHL1O00533 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CHL1O00533 AL512384.1-201ENST00000406683 331 ntBASIC20.26■□□□□ 0.83
CHL1O00533 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHL1O00533 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC20.26■□□□□ 0.83
CHL1O00533 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC20.26■□□□□ 0.83
CHL1O00533 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC20.26■□□□□ 0.83
CHL1O00533 AC026410.3-201ENST00000514280 936 ntBASIC20.26■□□□□ 0.83
CHL1O00533 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC20.26■□□□□ 0.83
CHL1O00533 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC20.26■□□□□ 0.83
CHL1O00533 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC20.26■□□□□ 0.83
CHL1O00533 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC20.26■□□□□ 0.83
CHL1O00533 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC20.26■□□□□ 0.83
CHL1O00533 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC20.26■□□□□ 0.83
CHL1O00533 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC20.26■□□□□ 0.83
CHL1O00533 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHL1O00533 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHL1O00533 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHL1O00533 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHL1O00533 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CHL1O00533 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC20.26■□□□□ 0.83
CHL1O00533 AP003680.1-201ENST00000598970 3660 ntBASIC20.26■□□□□ 0.83
CHL1O00533 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
CHL1O00533 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CHL1O00533 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC20.25■□□□□ 0.83
CHL1O00533 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CHL1O00533 AC009090.5-201ENST00000624886 2285 ntBASIC20.25■□□□□ 0.83
CHL1O00533 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CHL1O00533 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC20.25■□□□□ 0.83
CHL1O00533 CICP13-201ENST00000422015 2789 ntBASIC20.25■□□□□ 0.83
CHL1O00533 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHL1O00533 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHL1O00533 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHL1O00533 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC20.25■□□□□ 0.83
CHL1O00533 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC20.25■□□□□ 0.83
CHL1O00533 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC20.25■□□□□ 0.83
CHL1O00533 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC20.25■□□□□ 0.83
CHL1O00533 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHL1O00533 VDAC1P7-201ENST00000462417 847 ntBASIC20.25■□□□□ 0.83
CHL1O00533 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC20.25■□□□□ 0.83
CHL1O00533 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC20.25■□□□□ 0.83
CHL1O00533 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC20.25■□□□□ 0.83
CHL1O00533 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CHL1O00533 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC20.25■□□□□ 0.83
CHL1O00533 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHL1O00533 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHL1O00533 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHL1O00533 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC20.25■□□□□ 0.83
CHL1O00533 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHL1O00533 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHL1O00533 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHL1O00533 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHL1O00533 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHL1O00533 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHL1O00533 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CHL1O00533 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CHL1O00533 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC20.24■□□□□ 0.83
CHL1O00533 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC20.24■□□□□ 0.83
CHL1O00533 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC20.24■□□□□ 0.83
CHL1O00533 AC022188.1-201ENST00000620960 1664 ntBASIC20.24■□□□□ 0.83
CHL1O00533 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHL1O00533 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CHL1O00533 WBP2-203ENST00000433525 928 ntTSL 2 BASIC20.24■□□□□ 0.83
CHL1O00533 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC20.24■□□□□ 0.83
CHL1O00533 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC20.24■□□□□ 0.83
CHL1O00533 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHL1O00533 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC20.24■□□□□ 0.83
CHL1O00533 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC20.24■□□□□ 0.83
CHL1O00533 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC20.24■□□□□ 0.83
CHL1O00533 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC20.24■□□□□ 0.83
CHL1O00533 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
CHL1O00533 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHL1O00533 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHL1O00533 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHL1O00533 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC20.24■□□□□ 0.83
CHL1O00533 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
CHL1O00533 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHL1O00533 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHL1O00533 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHL1O00533 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHL1O00533 INTS4P2-202ENST00000614726 2019 ntBASIC20.24■□□□□ 0.83
CHL1O00533 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHL1O00533 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHL1O00533 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC20.23■□□□□ 0.83
CHL1O00533 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHL1O00533 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CHL1O00533 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHL1O00533 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
CHL1O00533 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHL1O00533 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHL1O00533 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
CHL1O00533 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHL1O00533 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CHL1O00533 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHL1O00533 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHL1O00533 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CHL1O00533 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC20.23■□□□□ 0.83
CHL1O00533 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC20.23■□□□□ 0.83
CHL1O00533 AC134915.1-201ENST00000426461 574 ntBASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms