Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.7■□□□□ 0.1
TMX2-CTNND1H3BSU7 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMX2-CTNND1H3BSU7 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.7■□□□□ 0.1
TMX2-CTNND1H3BSU7 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TMX2-CTNND1H3BSU7 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TMX2-CTNND1H3BSU7 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.7■□□□□ 0.1
TMX2-CTNND1H3BSU7 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMX2-CTNND1H3BSU7 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TMX2-CTNND1H3BSU7 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.7■□□□□ 0.1
TMX2-CTNND1H3BSU7 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.7■□□□□ 0.1
TMX2-CTNND1H3BSU7 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.7■□□□□ 0.1
TMX2-CTNND1H3BSU7 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMX2-CTNND1H3BSU7 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMX2-CTNND1H3BSU7 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMX2-CTNND1H3BSU7 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TMX2-CTNND1H3BSU7 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.7■□□□□ 0.1
TMX2-CTNND1H3BSU7 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.69■□□□□ 0.1
TMX2-CTNND1H3BSU7 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TMX2-CTNND1H3BSU7 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TMX2-CTNND1H3BSU7 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TMX2-CTNND1H3BSU7 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TMX2-CTNND1H3BSU7 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TMX2-CTNND1H3BSU7 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TMX2-CTNND1H3BSU7 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TMX2-CTNND1H3BSU7 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TMX2-CTNND1H3BSU7 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TMX2-CTNND1H3BSU7 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TMX2-CTNND1H3BSU7 ALOX12P2-203ENST00000570921 1945 ntBASIC15.69■□□□□ 0.1
TMX2-CTNND1H3BSU7 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.69■□□□□ 0.1
TMX2-CTNND1H3BSU7 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TMX2-CTNND1H3BSU7 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TMX2-CTNND1H3BSU7 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TMX2-CTNND1H3BSU7 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TMX2-CTNND1H3BSU7 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TMX2-CTNND1H3BSU7 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.69■□□□□ 0.1
TMX2-CTNND1H3BSU7 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.69■□□□□ 0.1
TMX2-CTNND1H3BSU7 AC093004.1-201ENST00000508850 424 ntBASIC15.69■□□□□ 0.1
TMX2-CTNND1H3BSU7 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TMX2-CTNND1H3BSU7 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
TMX2-CTNND1H3BSU7 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.69■□□□□ 0.1
TMX2-CTNND1H3BSU7 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.69■□□□□ 0.1
TMX2-CTNND1H3BSU7 AL132655.2-201ENST00000596276 594 ntBASIC15.69■□□□□ 0.1
TMX2-CTNND1H3BSU7 AL133215.2-201ENST00000609242 977 ntBASIC15.69■□□□□ 0.1
TMX2-CTNND1H3BSU7 AC008738.7-201ENST00000609744 511 ntBASIC15.69■□□□□ 0.1
TMX2-CTNND1H3BSU7 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.69■□□□□ 0.1
TMX2-CTNND1H3BSU7 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.69■□□□□ 0.1
TMX2-CTNND1H3BSU7 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.69■□□□□ 0.1
TMX2-CTNND1H3BSU7 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.69■□□□□ 0.1
TMX2-CTNND1H3BSU7 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.69■□□□□ 0.1
TMX2-CTNND1H3BSU7 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.69■□□□□ 0.1
TMX2-CTNND1H3BSU7 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.69■□□□□ 0.1
TMX2-CTNND1H3BSU7 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TMX2-CTNND1H3BSU7 AC013268.4-201ENST00000637413 2228 ntBASIC15.69■□□□□ 0.1
TMX2-CTNND1H3BSU7 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TMX2-CTNND1H3BSU7 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.69■□□□□ 0.1
TMX2-CTNND1H3BSU7 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TMX2-CTNND1H3BSU7 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.69■□□□□ 0.1
TMX2-CTNND1H3BSU7 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.69■□□□□ 0.1
TMX2-CTNND1H3BSU7 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.69■□□□□ 0.1
TMX2-CTNND1H3BSU7 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TMX2-CTNND1H3BSU7 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TMX2-CTNND1H3BSU7 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.69■□□□□ 0.1
TMX2-CTNND1H3BSU7 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TMX2-CTNND1H3BSU7 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.69■□□□□ 0.1
TMX2-CTNND1H3BSU7 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.68■□□□□ 0.1
TMX2-CTNND1H3BSU7 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TMX2-CTNND1H3BSU7 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.68■□□□□ 0.1
TMX2-CTNND1H3BSU7 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.68■□□□□ 0.1
TMX2-CTNND1H3BSU7 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMX2-CTNND1H3BSU7 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
TMX2-CTNND1H3BSU7 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
TMX2-CTNND1H3BSU7 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMX2-CTNND1H3BSU7 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMX2-CTNND1H3BSU7 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMX2-CTNND1H3BSU7 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMX2-CTNND1H3BSU7 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMX2-CTNND1H3BSU7 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMX2-CTNND1H3BSU7 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TMX2-CTNND1H3BSU7 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMX2-CTNND1H3BSU7 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.68■□□□□ 0.1
TMX2-CTNND1H3BSU7 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMX2-CTNND1H3BSU7 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.68■□□□□ 0.1
TMX2-CTNND1H3BSU7 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TMX2-CTNND1H3BSU7 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.68■□□□□ 0.1
TMX2-CTNND1H3BSU7 AC011495.1-201ENST00000498085 584 ntBASIC15.68■□□□□ 0.1
TMX2-CTNND1H3BSU7 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.68■□□□□ 0.1
TMX2-CTNND1H3BSU7 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.68■□□□□ 0.1
TMX2-CTNND1H3BSU7 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.68■□□□□ 0.1
TMX2-CTNND1H3BSU7 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TMX2-CTNND1H3BSU7 TCAF2P1-201ENST00000291129 2421 ntBASIC15.68■□□□□ 0.1
TMX2-CTNND1H3BSU7 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMX2-CTNND1H3BSU7 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.68■□□□□ 0.1
TMX2-CTNND1H3BSU7 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMX2-CTNND1H3BSU7 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.68■□□□□ 0.1
TMX2-CTNND1H3BSU7 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.68■□□□□ 0.1
TMX2-CTNND1H3BSU7 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TMX2-CTNND1H3BSU7 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TMX2-CTNND1H3BSU7 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMX2-CTNND1H3BSU7 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMX2-CTNND1H3BSU7 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms