Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 AL353779.1-201ENST00000434793 351 ntBASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA3F8WFD2 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NPIPA3F8WFD2 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
NPIPA3F8WFD2 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
NPIPA3F8WFD2 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.52□□□□□ -0.08
NPIPA3F8WFD2 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.08
NPIPA3F8WFD2 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
NPIPA3F8WFD2 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NPIPA3F8WFD2 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.52□□□□□ -0.08
NPIPA3F8WFD2 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
NPIPA3F8WFD2 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NPIPA3F8WFD2 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
NPIPA3F8WFD2 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
NPIPA3F8WFD2 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
NPIPA3F8WFD2 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NPIPA3F8WFD2 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
NPIPA3F8WFD2 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.52□□□□□ -0.09
NPIPA3F8WFD2 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NPIPA3F8WFD2 SPDYE19P-201ENST00000338590 713 ntBASIC14.52□□□□□ -0.09
NPIPA3F8WFD2 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NPIPA3F8WFD2 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NPIPA3F8WFD2 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.52□□□□□ -0.09
NPIPA3F8WFD2 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.52□□□□□ -0.09
NPIPA3F8WFD2 DOC2GP-202ENST00000514950 1163 ntBASIC14.52□□□□□ -0.09
NPIPA3F8WFD2 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
NPIPA3F8WFD2 ZNF890P-202ENST00000530367 1156 ntBASIC14.52□□□□□ -0.09
NPIPA3F8WFD2 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NPIPA3F8WFD2 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.52□□□□□ -0.09
NPIPA3F8WFD2 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.52□□□□□ -0.09
NPIPA3F8WFD2 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.52□□□□□ -0.09
NPIPA3F8WFD2 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.09
NPIPA3F8WFD2 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
NPIPA3F8WFD2 MIR6069-201ENST00000620069 79 ntBASIC14.52□□□□□ -0.09
NPIPA3F8WFD2 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NPIPA3F8WFD2 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NPIPA3F8WFD2 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NPIPA3F8WFD2 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NPIPA3F8WFD2 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NPIPA3F8WFD2 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
NPIPA3F8WFD2 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
NPIPA3F8WFD2 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA3F8WFD2 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
NPIPA3F8WFD2 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA3F8WFD2 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
NPIPA3F8WFD2 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
NPIPA3F8WFD2 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA3F8WFD2 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA3F8WFD2 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA3F8WFD2 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA3F8WFD2 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
NPIPA3F8WFD2 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA3F8WFD2 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA3F8WFD2 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NPIPA3F8WFD2 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms