Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.9■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.9■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
C1QTNF3-AMACRE9PGA6 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.89■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.89■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.89■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.89■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.89■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 AL607033.1-201ENST00000623900 1599 ntBASIC15.89■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.89■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.89■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.89■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.89■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.89■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.89■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 AC092552.1-201ENST00000547243 906 ntBASIC15.89■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.89■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 AC097359.3-201ENST00000603982 1210 ntBASIC15.89■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.89■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.89■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.89■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.89■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.89■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.89■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.88■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.88■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.88■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.88■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 AL442647.2-201ENST00000429864 857 ntBASIC15.88■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 FAM86LP-201ENST00000478302 853 ntBASIC15.88■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 RPL13AP25-201ENST00000484130 612 ntBASIC15.88■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.88■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.88■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.88■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.88■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 WFDC1-204ENST00000613603 549 ntBASIC15.88■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.88■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.88■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 IGHV3-72-202ENST00000621503 303 ntBASIC15.88■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.88■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.88■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.87■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 AL662844.4-201ENST00000606367 2838 ntBASIC15.87■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
C1QTNF3-AMACRE9PGA6 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms