Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC66A2RUB6 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC66A2RUB6 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC66A2RUB6 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CCDC66A2RUB6 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
CCDC66A2RUB6 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC66A2RUB6 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.37■□□□□ 0.37
CCDC66A2RUB6 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.37■□□□□ 0.37
CCDC66A2RUB6 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.37■□□□□ 0.37
CCDC66A2RUB6 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.37■□□□□ 0.37
CCDC66A2RUB6 KRT126P-201ENST00000549467 1181 ntBASIC17.37■□□□□ 0.37
CCDC66A2RUB6 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
CCDC66A2RUB6 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.37■□□□□ 0.37
CCDC66A2RUB6 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC66A2RUB6 AC008667.4-201ENST00000607370 168 ntBASIC17.37■□□□□ 0.37
CCDC66A2RUB6 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.37■□□□□ 0.37
CCDC66A2RUB6 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC66A2RUB6 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC66A2RUB6 AC009090.5-201ENST00000624886 2285 ntBASIC17.37■□□□□ 0.37
CCDC66A2RUB6 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CCDC66A2RUB6 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC66A2RUB6 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
CCDC66A2RUB6 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CCDC66A2RUB6 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC66A2RUB6 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC66A2RUB6 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CCDC66A2RUB6 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC66A2RUB6 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC66A2RUB6 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC66A2RUB6 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC66A2RUB6 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC66A2RUB6 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC66A2RUB6 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC66A2RUB6 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC66A2RUB6 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
CCDC66A2RUB6 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC66A2RUB6 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC66A2RUB6 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC66A2RUB6 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC66A2RUB6 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC66A2RUB6 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC66A2RUB6 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC66A2RUB6 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CCDC66A2RUB6 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC66A2RUB6 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC66A2RUB6 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC66A2RUB6 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC66A2RUB6 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.36■□□□□ 0.37
CCDC66A2RUB6 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC17.36■□□□□ 0.37
CCDC66A2RUB6 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC66A2RUB6 DUSP5P1-201ENST00000441325 1139 ntBASIC17.36■□□□□ 0.37
CCDC66A2RUB6 OR7E14P-202ENST00000530490 1290 ntBASIC17.36■□□□□ 0.37
CCDC66A2RUB6 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.36■□□□□ 0.37
CCDC66A2RUB6 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.36■□□□□ 0.37
CCDC66A2RUB6 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.36■□□□□ 0.37
CCDC66A2RUB6 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CCDC66A2RUB6 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC66A2RUB6 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.36■□□□□ 0.37
CCDC66A2RUB6 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC66A2RUB6 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.36■□□□□ 0.37
CCDC66A2RUB6 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC66A2RUB6 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC66A2RUB6 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC66A2RUB6 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC66A2RUB6 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC66A2RUB6 ADAMTS7P1-201ENST00000613213 4793 ntBASIC17.36■□□□□ 0.37
CCDC66A2RUB6 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC66A2RUB6 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC66A2RUB6 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC66A2RUB6 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
CCDC66A2RUB6 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC66A2RUB6 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC66A2RUB6 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
CCDC66A2RUB6 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC66A2RUB6 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC66A2RUB6 AC010327.5-201ENST00000586923 3061 ntBASIC17.35■□□□□ 0.37
CCDC66A2RUB6 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC66A2RUB6 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC66A2RUB6 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC66A2RUB6 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC66A2RUB6 CR383656.2-201ENST00000548656 2254 ntBASIC17.35■□□□□ 0.37
CCDC66A2RUB6 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC66A2RUB6 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC66A2RUB6 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC66A2RUB6 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC66A2RUB6 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC66A2RUB6 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC66A2RUB6 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC66A2RUB6 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC66A2RUB6 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC66A2RUB6 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.35■□□□□ 0.37
CCDC66A2RUB6 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC66A2RUB6 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.35■□□□□ 0.37
CCDC66A2RUB6 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC66A2RUB6 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC66A2RUB6 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC66A2RUB6 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC66A2RUB6 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC66A2RUB6 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CCDC66A2RUB6 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms