Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV5A0A0B4J249 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC12.45□□□□□ -0.42
TRAV5A0A0B4J249 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
TRAV5A0A0B4J249 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV5A0A0B4J249 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV5A0A0B4J249 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV5A0A0B4J249 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV5A0A0B4J249 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV5A0A0B4J249 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV5A0A0B4J249 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC12.45□□□□□ -0.42
TRAV5A0A0B4J249 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC12.45□□□□□ -0.42
TRAV5A0A0B4J249 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV5A0A0B4J249 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC12.44□□□□□ -0.42
TRAV5A0A0B4J249 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC12.44□□□□□ -0.42
TRAV5A0A0B4J249 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV5A0A0B4J249 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV5A0A0B4J249 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV5A0A0B4J249 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV5A0A0B4J249 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV5A0A0B4J249 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV5A0A0B4J249 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV5A0A0B4J249 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC12.44□□□□□ -0.42
TRAV5A0A0B4J249 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV5A0A0B4J249 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC12.44□□□□□ -0.42
TRAV5A0A0B4J249 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV5A0A0B4J249 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
TRAV5A0A0B4J249 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV5A0A0B4J249 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
TRAV5A0A0B4J249 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV5A0A0B4J249 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV5A0A0B4J249 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC12.44□□□□□ -0.42
TRAV5A0A0B4J249 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV5A0A0B4J249 COCH-203ENST00000460581 2688 ntTSL 2 BASIC12.44□□□□□ -0.42
TRAV5A0A0B4J249 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV5A0A0B4J249 INIP-202ENST00000374236 874 ntTSL 2 BASIC12.44□□□□□ -0.42
TRAV5A0A0B4J249 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV5A0A0B4J249 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV5A0A0B4J249 UPK3BP1-201ENST00000428678 509 ntBASIC12.44□□□□□ -0.42
TRAV5A0A0B4J249 HNRNPDP1-201ENST00000439535 754 ntBASIC12.44□□□□□ -0.42
TRAV5A0A0B4J249 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC12.44□□□□□ -0.42
TRAV5A0A0B4J249 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC12.44□□□□□ -0.42
TRAV5A0A0B4J249 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC12.44□□□□□ -0.42
TRAV5A0A0B4J249 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV5A0A0B4J249 TBCB-205ENST00000585746 875 ntTSL 3 BASIC12.44□□□□□ -0.42
TRAV5A0A0B4J249 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC12.44□□□□□ -0.42
TRAV5A0A0B4J249 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV5A0A0B4J249 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC12.44□□□□□ -0.42
TRAV5A0A0B4J249 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
TRAV5A0A0B4J249 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC12.44□□□□□ -0.42
TRAV5A0A0B4J249 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
TRAV5A0A0B4J249 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV5A0A0B4J249 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC12.44□□□□□ -0.42
TRAV5A0A0B4J249 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV5A0A0B4J249 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
TRAV5A0A0B4J249 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV5A0A0B4J249 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV5A0A0B4J249 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC12.44□□□□□ -0.42
TRAV5A0A0B4J249 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
TRAV5A0A0B4J249 LRRFIP1P1-201ENST00000498774 2246 ntBASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 ZEB1-AS1-208ENST00000607166 2503 ntBASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 RPS29-206ENST00000557111 488 ntTSL 2 BASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 MIR3909-201ENST00000579518 119 ntBASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 NT5C-211ENST00000582170 653 ntTSL 3 BASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 AL445228.2-201ENST00000605589 952 ntBASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 AL365330.1-201ENST00000607459 531 ntBASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 AL645728.2-201ENST00000641974 660 ntBASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms