Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC19.23■□□□□ 0.67
DDX49Q9Y6V7 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC19.23■□□□□ 0.67
DDX49Q9Y6V7 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
DDX49Q9Y6V7 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
DDX49Q9Y6V7 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
DDX49Q9Y6V7 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC19.23■□□□□ 0.67
DDX49Q9Y6V7 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
DDX49Q9Y6V7 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
DDX49Q9Y6V7 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DDX49Q9Y6V7 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DDX49Q9Y6V7 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DDX49Q9Y6V7 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
DDX49Q9Y6V7 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DDX49Q9Y6V7 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.23■□□□□ 0.67
DDX49Q9Y6V7 AL592309.1-201ENST00000443127 649 ntBASIC19.23■□□□□ 0.67
DDX49Q9Y6V7 SPDYE11-202ENST00000450699 704 ntBASIC19.23■□□□□ 0.67
DDX49Q9Y6V7 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
DDX49Q9Y6V7 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DDX49Q9Y6V7 SPCS2P1-201ENST00000561636 679 ntBASIC19.23■□□□□ 0.67
DDX49Q9Y6V7 SPDYE9P-201ENST00000570642 692 ntBASIC19.23■□□□□ 0.67
DDX49Q9Y6V7 SPDYE10P-202ENST00000612005 668 ntBASIC19.23■□□□□ 0.67
DDX49Q9Y6V7 SPDYE8P-202ENST00000612377 668 ntBASIC19.23■□□□□ 0.67
DDX49Q9Y6V7 AL645728.2-201ENST00000641974 660 ntBASIC19.23■□□□□ 0.67
DDX49Q9Y6V7 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
DDX49Q9Y6V7 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC19.23■□□□□ 0.67
DDX49Q9Y6V7 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
DDX49Q9Y6V7 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DDX49Q9Y6V7 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC19.23■□□□□ 0.67
DDX49Q9Y6V7 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
DDX49Q9Y6V7 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
DDX49Q9Y6V7 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.23■□□□□ 0.67
DDX49Q9Y6V7 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
DDX49Q9Y6V7 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC19.23■□□□□ 0.67
DDX49Q9Y6V7 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
DDX49Q9Y6V7 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
DDX49Q9Y6V7 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DDX49Q9Y6V7 AC023157.3-201ENST00000619086 2088 ntBASIC19.23■□□□□ 0.67
DDX49Q9Y6V7 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC19.23■□□□□ 0.67
DDX49Q9Y6V7 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DDX49Q9Y6V7 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDX49Q9Y6V7 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDX49Q9Y6V7 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDX49Q9Y6V7 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDX49Q9Y6V7 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
DDX49Q9Y6V7 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDX49Q9Y6V7 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
DDX49Q9Y6V7 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDX49Q9Y6V7 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC19.22■□□□□ 0.67
DDX49Q9Y6V7 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDX49Q9Y6V7 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
DDX49Q9Y6V7 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.22■□□□□ 0.67
DDX49Q9Y6V7 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.22■□□□□ 0.67
DDX49Q9Y6V7 GPS2P2-201ENST00000430745 888 ntBASIC19.22■□□□□ 0.67
DDX49Q9Y6V7 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.22■□□□□ 0.67
DDX49Q9Y6V7 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
DDX49Q9Y6V7 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.22■□□□□ 0.67
DDX49Q9Y6V7 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC19.22■□□□□ 0.67
DDX49Q9Y6V7 MIR3197-201ENST00000582241 73 ntBASIC19.22■□□□□ 0.67
DDX49Q9Y6V7 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.22■□□□□ 0.67
DDX49Q9Y6V7 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
DDX49Q9Y6V7 AC009093.7-201ENST00000623853 1223 ntBASIC19.22■□□□□ 0.67
DDX49Q9Y6V7 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDX49Q9Y6V7 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
DDX49Q9Y6V7 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDX49Q9Y6V7 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDX49Q9Y6V7 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC19.22■□□□□ 0.67
DDX49Q9Y6V7 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
DDX49Q9Y6V7 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDX49Q9Y6V7 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDX49Q9Y6V7 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
DDX49Q9Y6V7 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDX49Q9Y6V7 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
DDX49Q9Y6V7 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDX49Q9Y6V7 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
DDX49Q9Y6V7 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
DDX49Q9Y6V7 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC19.22■□□□□ 0.67
DDX49Q9Y6V7 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC19.22■□□□□ 0.67
DDX49Q9Y6V7 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDX49Q9Y6V7 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDX49Q9Y6V7 AP003680.1-201ENST00000598970 3660 ntBASIC19.21■□□□□ 0.67
DDX49Q9Y6V7 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.21■□□□□ 0.67
DDX49Q9Y6V7 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDX49Q9Y6V7 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDX49Q9Y6V7 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.21■□□□□ 0.67
DDX49Q9Y6V7 SPCS2P4-201ENST00000436160 681 ntBASIC19.21■□□□□ 0.67
DDX49Q9Y6V7 BCRP1-201ENST00000444246 691 ntBASIC19.21■□□□□ 0.67
DDX49Q9Y6V7 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.21■□□□□ 0.67
DDX49Q9Y6V7 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC19.21■□□□□ 0.67
DDX49Q9Y6V7 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC19.21■□□□□ 0.67
DDX49Q9Y6V7 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.21■□□□□ 0.67
DDX49Q9Y6V7 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.21■□□□□ 0.67
DDX49Q9Y6V7 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.21■□□□□ 0.67
DDX49Q9Y6V7 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC19.21■□□□□ 0.67
DDX49Q9Y6V7 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
DDX49Q9Y6V7 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDX49Q9Y6V7 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
DDX49Q9Y6V7 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDX49Q9Y6V7 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDX49Q9Y6V7 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDX49Q9Y6V7 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms