Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 AC133552.6-201ENST00000613406 534 ntBASIC16.53■□□□□ 0.24
YIPF1Q9Y548 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.53■□□□□ 0.24
YIPF1Q9Y548 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.53■□□□□ 0.24
YIPF1Q9Y548 COX11-210ENST00000639671 696 ntBASIC16.53■□□□□ 0.24
YIPF1Q9Y548 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
YIPF1Q9Y548 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
YIPF1Q9Y548 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.53■□□□□ 0.24
YIPF1Q9Y548 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
YIPF1Q9Y548 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.53■□□□□ 0.24
YIPF1Q9Y548 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
YIPF1Q9Y548 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
YIPF1Q9Y548 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
YIPF1Q9Y548 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.53■□□□□ 0.24
YIPF1Q9Y548 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
YIPF1Q9Y548 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
YIPF1Q9Y548 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
YIPF1Q9Y548 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.52■□□□□ 0.24
YIPF1Q9Y548 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
YIPF1Q9Y548 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.24
YIPF1Q9Y548 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.52■□□□□ 0.24
YIPF1Q9Y548 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
YIPF1Q9Y548 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
YIPF1Q9Y548 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
YIPF1Q9Y548 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
YIPF1Q9Y548 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
YIPF1Q9Y548 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
YIPF1Q9Y548 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.52■□□□□ 0.24
YIPF1Q9Y548 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.52■□□□□ 0.24
YIPF1Q9Y548 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
YIPF1Q9Y548 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
YIPF1Q9Y548 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.52■□□□□ 0.24
YIPF1Q9Y548 AC068587.3-201ENST00000526613 355 ntBASIC16.52■□□□□ 0.24
YIPF1Q9Y548 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
YIPF1Q9Y548 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.52■□□□□ 0.24
YIPF1Q9Y548 AP005482.1-201ENST00000563722 1273 ntBASIC16.52■□□□□ 0.24
YIPF1Q9Y548 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.52■□□□□ 0.24
YIPF1Q9Y548 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.52■□□□□ 0.24
YIPF1Q9Y548 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.52■□□□□ 0.24
YIPF1Q9Y548 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.52■□□□□ 0.24
YIPF1Q9Y548 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.52■□□□□ 0.24
YIPF1Q9Y548 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
YIPF1Q9Y548 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
YIPF1Q9Y548 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.52■□□□□ 0.23
YIPF1Q9Y548 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
YIPF1Q9Y548 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.52■□□□□ 0.23
YIPF1Q9Y548 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
YIPF1Q9Y548 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.52■□□□□ 0.23
YIPF1Q9Y548 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
YIPF1Q9Y548 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
YIPF1Q9Y548 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
YIPF1Q9Y548 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
YIPF1Q9Y548 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
YIPF1Q9Y548 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
YIPF1Q9Y548 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
YIPF1Q9Y548 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
YIPF1Q9Y548 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.51■□□□□ 0.23
YIPF1Q9Y548 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
YIPF1Q9Y548 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
YIPF1Q9Y548 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
YIPF1Q9Y548 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
YIPF1Q9Y548 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
YIPF1Q9Y548 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
YIPF1Q9Y548 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
YIPF1Q9Y548 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
YIPF1Q9Y548 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.51■□□□□ 0.23
YIPF1Q9Y548 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
YIPF1Q9Y548 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
YIPF1Q9Y548 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
YIPF1Q9Y548 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.51■□□□□ 0.23
YIPF1Q9Y548 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.51■□□□□ 0.23
YIPF1Q9Y548 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
YIPF1Q9Y548 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
YIPF1Q9Y548 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
YIPF1Q9Y548 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.51■□□□□ 0.23
YIPF1Q9Y548 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.51■□□□□ 0.23
YIPF1Q9Y548 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
YIPF1Q9Y548 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
YIPF1Q9Y548 AC104989.1-201ENST00000519711 778 ntBASIC16.51■□□□□ 0.23
YIPF1Q9Y548 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.51■□□□□ 0.23
YIPF1Q9Y548 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.51■□□□□ 0.23
YIPF1Q9Y548 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.51■□□□□ 0.23
YIPF1Q9Y548 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
YIPF1Q9Y548 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.51■□□□□ 0.23
YIPF1Q9Y548 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
YIPF1Q9Y548 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
YIPF1Q9Y548 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
YIPF1Q9Y548 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.51■□□□□ 0.23
YIPF1Q9Y548 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
YIPF1Q9Y548 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
YIPF1Q9Y548 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.51■□□□□ 0.23
YIPF1Q9Y548 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
YIPF1Q9Y548 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.51■□□□□ 0.23
YIPF1Q9Y548 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.51■□□□□ 0.23
YIPF1Q9Y548 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
YIPF1Q9Y548 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
YIPF1Q9Y548 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.51■□□□□ 0.23
YIPF1Q9Y548 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
YIPF1Q9Y548 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
YIPF1Q9Y548 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
YIPF1Q9Y548 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms