Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
HHLA3Q9XRX5 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
HHLA3Q9XRX5 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
HHLA3Q9XRX5 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
HHLA3Q9XRX5 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HHLA3Q9XRX5 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HHLA3Q9XRX5 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HHLA3Q9XRX5 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
HHLA3Q9XRX5 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
HHLA3Q9XRX5 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HHLA3Q9XRX5 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HHLA3Q9XRX5 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC11.73□□□□□ -0.53
HHLA3Q9XRX5 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HHLA3Q9XRX5 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
HHLA3Q9XRX5 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HHLA3Q9XRX5 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HHLA3Q9XRX5 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HHLA3Q9XRX5 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
HHLA3Q9XRX5 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HHLA3Q9XRX5 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC11.73□□□□□ -0.53
HHLA3Q9XRX5 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
HHLA3Q9XRX5 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
HHLA3Q9XRX5 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC11.73□□□□□ -0.53
HHLA3Q9XRX5 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
HHLA3Q9XRX5 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC11.73□□□□□ -0.53
HHLA3Q9XRX5 FIS1-203ENST00000442303 631 ntTSL 3 BASIC11.73□□□□□ -0.53
HHLA3Q9XRX5 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
HHLA3Q9XRX5 KRT18P3-201ENST00000451602 1288 ntBASIC11.73□□□□□ -0.53
HHLA3Q9XRX5 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
HHLA3Q9XRX5 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
HHLA3Q9XRX5 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC11.73□□□□□ -0.53
HHLA3Q9XRX5 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC11.73□□□□□ -0.53
HHLA3Q9XRX5 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC11.73□□□□□ -0.53
HHLA3Q9XRX5 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC11.73□□□□□ -0.53
HHLA3Q9XRX5 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC11.73□□□□□ -0.53
HHLA3Q9XRX5 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC11.73□□□□□ -0.53
HHLA3Q9XRX5 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC11.73□□□□□ -0.53
HHLA3Q9XRX5 PIN1-206ENST00000587625 878 ntTSL 2 BASIC11.73□□□□□ -0.53
HHLA3Q9XRX5 GPAA1P2-202ENST00000606848 1787 ntBASIC11.73□□□□□ -0.53
HHLA3Q9XRX5 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC11.73□□□□□ -0.53
HHLA3Q9XRX5 AC025580.3-201ENST00000617932 1424 ntBASIC11.73□□□□□ -0.53
HHLA3Q9XRX5 FAM197Y3-203ENST00000618346 717 ntBASIC11.73□□□□□ -0.53
HHLA3Q9XRX5 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HHLA3Q9XRX5 TMBIM7P-203ENST00000641617 1718 ntBASIC11.73□□□□□ -0.53
HHLA3Q9XRX5 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
HHLA3Q9XRX5 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HHLA3Q9XRX5 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC11.73□□□□□ -0.53
HHLA3Q9XRX5 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HHLA3Q9XRX5 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HHLA3Q9XRX5 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HHLA3Q9XRX5 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HHLA3Q9XRX5 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC11.73□□□□□ -0.53
HHLA3Q9XRX5 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
HHLA3Q9XRX5 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
HHLA3Q9XRX5 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 AC020658.6-201ENST00000623564 1870 ntBASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 LINC01144-201ENST00000626198 1710 ntBASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 GGT3P-204ENST00000453783 1664 ntBASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms