Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SHANK2Q9UPX8 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
SHANK2Q9UPX8 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SHANK2Q9UPX8 AL139094.1-201ENST00000405549 1188 ntBASIC23.22■■□□□ 1.31
SHANK2Q9UPX8 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SHANK2Q9UPX8 CALR4P-201ENST00000431943 946 ntBASIC23.22■■□□□ 1.31
SHANK2Q9UPX8 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC23.22■■□□□ 1.31
SHANK2Q9UPX8 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC23.22■■□□□ 1.31
SHANK2Q9UPX8 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC23.22■■□□□ 1.31
SHANK2Q9UPX8 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC23.22■■□□□ 1.31
SHANK2Q9UPX8 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SHANK2Q9UPX8 PRKN-211ENST00000615065 261 ntTSL 5 BASIC23.22■■□□□ 1.31
SHANK2Q9UPX8 CYP2T1P-202ENST00000641596 2535 ntBASIC23.22■■□□□ 1.31
SHANK2Q9UPX8 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SHANK2Q9UPX8 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
SHANK2Q9UPX8 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC23.21■■□□□ 1.31
SHANK2Q9UPX8 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SHANK2Q9UPX8 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC23.21■■□□□ 1.31
SHANK2Q9UPX8 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC23.21■■□□□ 1.31
SHANK2Q9UPX8 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC23.21■■□□□ 1.31
SHANK2Q9UPX8 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
SHANK2Q9UPX8 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SHANK2Q9UPX8 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC23.21■■□□□ 1.31
SHANK2Q9UPX8 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SHANK2Q9UPX8 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SHANK2Q9UPX8 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SHANK2Q9UPX8 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SHANK2Q9UPX8 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC23.21■■□□□ 1.31
SHANK2Q9UPX8 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC23.21■■□□□ 1.31
SHANK2Q9UPX8 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC23.21■■□□□ 1.31
SHANK2Q9UPX8 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
SHANK2Q9UPX8 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC23.21■■□□□ 1.31
SHANK2Q9UPX8 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC23.21■■□□□ 1.31
SHANK2Q9UPX8 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC23.21■■□□□ 1.31
SHANK2Q9UPX8 AP003171.2-201ENST00000528208 925 ntBASIC23.21■■□□□ 1.31
SHANK2Q9UPX8 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC23.21■■□□□ 1.31
SHANK2Q9UPX8 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC23.21■■□□□ 1.31
SHANK2Q9UPX8 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
SHANK2Q9UPX8 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC23.21■■□□□ 1.31
SHANK2Q9UPX8 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC23.21■■□□□ 1.31
SHANK2Q9UPX8 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
SHANK2Q9UPX8 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SHANK2Q9UPX8 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SHANK2Q9UPX8 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SHANK2Q9UPX8 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC23.2■■□□□ 1.31
SHANK2Q9UPX8 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
SHANK2Q9UPX8 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SHANK2Q9UPX8 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
SHANK2Q9UPX8 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SHANK2Q9UPX8 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SHANK2Q9UPX8 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SHANK2Q9UPX8 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SHANK2Q9UPX8 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
SHANK2Q9UPX8 AL645937.2-201ENST00000396808 931 ntBASIC23.2■■□□□ 1.3
SHANK2Q9UPX8 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
SHANK2Q9UPX8 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
SHANK2Q9UPX8 EIF3FP3-201ENST00000434851 1086 ntBASIC23.2■■□□□ 1.3
SHANK2Q9UPX8 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC23.2■■□□□ 1.3
SHANK2Q9UPX8 MTX1P1-201ENST00000440904 838 ntBASIC23.2■■□□□ 1.3
SHANK2Q9UPX8 RNA5SP486-201ENST00000515961 83 ntBASIC23.2■■□□□ 1.3
SHANK2Q9UPX8 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SHANK2Q9UPX8 AC023310.1-201ENST00000554836 735 ntBASIC23.2■■□□□ 1.3
SHANK2Q9UPX8 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC23.2■■□□□ 1.3
SHANK2Q9UPX8 AC079328.1-201ENST00000560358 952 ntBASIC23.2■■□□□ 1.3
SHANK2Q9UPX8 KLK3-211ENST00000597483 810 ntTSL 2 BASIC23.2■■□□□ 1.3
SHANK2Q9UPX8 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SHANK2Q9UPX8 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC23.2■■□□□ 1.3
SHANK2Q9UPX8 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC23.2■■□□□ 1.3
SHANK2Q9UPX8 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC23.2■■□□□ 1.3
SHANK2Q9UPX8 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SHANK2Q9UPX8 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
SHANK2Q9UPX8 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SHANK2Q9UPX8 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
SHANK2Q9UPX8 AC092364.2-201ENST00000596710 2692 ntBASIC23.2■■□□□ 1.3
SHANK2Q9UPX8 AR-207ENST00000612010 3896 ntTSL 5 BASIC23.2■■□□□ 1.3
SHANK2Q9UPX8 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SHANK2Q9UPX8 AL603832.2-201ENST00000566195 2125 ntBASIC23.2■■□□□ 1.3
SHANK2Q9UPX8 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
SHANK2Q9UPX8 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC23.2■■□□□ 1.3
SHANK2Q9UPX8 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
SHANK2Q9UPX8 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC23.2■■□□□ 1.3
SHANK2Q9UPX8 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC23.2■■□□□ 1.3
SHANK2Q9UPX8 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SHANK2Q9UPX8 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
SHANK2Q9UPX8 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SHANK2Q9UPX8 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
SHANK2Q9UPX8 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SHANK2Q9UPX8 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SHANK2Q9UPX8 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
SHANK2Q9UPX8 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SHANK2Q9UPX8 AC015967.2-201ENST00000624092 234 ntBASIC23.19■■□□□ 1.3
SHANK2Q9UPX8 AC006435.4-201ENST00000625037 234 ntBASIC23.19■■□□□ 1.3
SHANK2Q9UPX8 AL356737.1-201ENST00000634391 234 ntBASIC23.19■■□□□ 1.3
SHANK2Q9UPX8 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
SHANK2Q9UPX8 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SHANK2Q9UPX8 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SHANK2Q9UPX8 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
SHANK2Q9UPX8 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
SHANK2Q9UPX8 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC23.19■■□□□ 1.3
SHANK2Q9UPX8 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms