Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 SLC7A15P-201ENST00000424028 1363 ntBASIC20.54■□□□□ 0.88
PDZRN3Q9UPQ7 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC20.54■□□□□ 0.88
PDZRN3Q9UPQ7 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PDZRN3Q9UPQ7 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDZRN3Q9UPQ7 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC20.54■□□□□ 0.88
PDZRN3Q9UPQ7 HYMAI-201ENST00000635591 3347 ntBASIC20.54■□□□□ 0.88
PDZRN3Q9UPQ7 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PDZRN3Q9UPQ7 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDZRN3Q9UPQ7 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PDZRN3Q9UPQ7 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
PDZRN3Q9UPQ7 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDZRN3Q9UPQ7 VILL-207ENST00000465644 1857 ntTSL 5 BASIC20.54■□□□□ 0.88
PDZRN3Q9UPQ7 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PDZRN3Q9UPQ7 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDZRN3Q9UPQ7 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDZRN3Q9UPQ7 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDZRN3Q9UPQ7 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PDZRN3Q9UPQ7 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC20.53■□□□□ 0.88
PDZRN3Q9UPQ7 MBP-202ENST00000355994 2772 ntTSL 5 BASIC20.53■□□□□ 0.88
PDZRN3Q9UPQ7 LINC02447-202ENST00000501888 2146 ntBASIC20.53■□□□□ 0.88
PDZRN3Q9UPQ7 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDZRN3Q9UPQ7 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
PDZRN3Q9UPQ7 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PDZRN3Q9UPQ7 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC20.53■□□□□ 0.88
PDZRN3Q9UPQ7 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
PDZRN3Q9UPQ7 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC20.53■□□□□ 0.88
PDZRN3Q9UPQ7 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC20.53■□□□□ 0.88
PDZRN3Q9UPQ7 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PDZRN3Q9UPQ7 CD81-207ENST00000481687 890 ntTSL 2 BASIC20.53■□□□□ 0.88
PDZRN3Q9UPQ7 AC055876.2-201ENST00000531834 546 ntBASIC20.53■□□□□ 0.88
PDZRN3Q9UPQ7 RPS15-212ENST00000593052 629 ntTSL 2 BASIC20.53■□□□□ 0.88
PDZRN3Q9UPQ7 AC099568.2-201ENST00000609194 695 ntBASIC20.53■□□□□ 0.88
PDZRN3Q9UPQ7 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
PDZRN3Q9UPQ7 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC20.53■□□□□ 0.88
PDZRN3Q9UPQ7 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC20.53■□□□□ 0.88
PDZRN3Q9UPQ7 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDZRN3Q9UPQ7 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PDZRN3Q9UPQ7 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC20.53■□□□□ 0.88
PDZRN3Q9UPQ7 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC20.53■□□□□ 0.88
PDZRN3Q9UPQ7 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDZRN3Q9UPQ7 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDZRN3Q9UPQ7 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC20.53■□□□□ 0.88
PDZRN3Q9UPQ7 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
PDZRN3Q9UPQ7 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PDZRN3Q9UPQ7 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PDZRN3Q9UPQ7 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PDZRN3Q9UPQ7 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
PDZRN3Q9UPQ7 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
PDZRN3Q9UPQ7 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC20.52■□□□□ 0.88
PDZRN3Q9UPQ7 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC20.52■□□□□ 0.88
PDZRN3Q9UPQ7 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC20.52■□□□□ 0.88
PDZRN3Q9UPQ7 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDZRN3Q9UPQ7 DPM2-202ENST00000373110 738 ntTSL 2 BASIC20.52■□□□□ 0.88
PDZRN3Q9UPQ7 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PDZRN3Q9UPQ7 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDZRN3Q9UPQ7 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
PDZRN3Q9UPQ7 MXI1-205ENST00000393134 889 ntTSL 2 BASIC20.52■□□□□ 0.88
PDZRN3Q9UPQ7 RBM39-205ENST00000397370 612 ntTSL 2 BASIC20.52■□□□□ 0.88
PDZRN3Q9UPQ7 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC20.52■□□□□ 0.88
PDZRN3Q9UPQ7 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDZRN3Q9UPQ7 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC20.52■□□□□ 0.88
PDZRN3Q9UPQ7 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC20.52■□□□□ 0.88
PDZRN3Q9UPQ7 NAA38-206ENST00000576384 424 ntTSL 2 BASIC20.52■□□□□ 0.88
PDZRN3Q9UPQ7 CHCHD2P3-201ENST00000603038 451 ntBASIC20.52■□□□□ 0.88
PDZRN3Q9UPQ7 AC008494.3-201ENST00000606615 944 ntBASIC20.52■□□□□ 0.88
PDZRN3Q9UPQ7 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC20.52■□□□□ 0.88
PDZRN3Q9UPQ7 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDZRN3Q9UPQ7 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDZRN3Q9UPQ7 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
PDZRN3Q9UPQ7 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDZRN3Q9UPQ7 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
PDZRN3Q9UPQ7 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PDZRN3Q9UPQ7 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC20.52■□□□□ 0.87
PDZRN3Q9UPQ7 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC20.51■□□□□ 0.87
PDZRN3Q9UPQ7 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDZRN3Q9UPQ7 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PDZRN3Q9UPQ7 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDZRN3Q9UPQ7 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PDZRN3Q9UPQ7 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
PDZRN3Q9UPQ7 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
PDZRN3Q9UPQ7 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDZRN3Q9UPQ7 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDZRN3Q9UPQ7 AC112492.5-201ENST00000421897 457 ntBASIC20.51■□□□□ 0.87
PDZRN3Q9UPQ7 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC20.51■□□□□ 0.87
PDZRN3Q9UPQ7 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC20.51■□□□□ 0.87
PDZRN3Q9UPQ7 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC20.51■□□□□ 0.87
PDZRN3Q9UPQ7 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
PDZRN3Q9UPQ7 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
PDZRN3Q9UPQ7 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC20.51■□□□□ 0.87
PDZRN3Q9UPQ7 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC20.51■□□□□ 0.87
PDZRN3Q9UPQ7 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC20.51■□□□□ 0.87
PDZRN3Q9UPQ7 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC20.51■□□□□ 0.87
PDZRN3Q9UPQ7 FHL2-212ENST00000607522 759 ntTSL 2 BASIC20.51■□□□□ 0.87
PDZRN3Q9UPQ7 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDZRN3Q9UPQ7 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
PDZRN3Q9UPQ7 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
PDZRN3Q9UPQ7 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC20.51■□□□□ 0.87
PDZRN3Q9UPQ7 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PDZRN3Q9UPQ7 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PDZRN3Q9UPQ7 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms