Protein–RNA interactions for Protein: Q9UJ41

RABGEF1, Rab5 GDP/GTP exchange factor, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RABGEF1Q9UJ41 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RABGEF1Q9UJ41 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.43■□□□□ 0.22
RABGEF1Q9UJ41 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RABGEF1Q9UJ41 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.43■□□□□ 0.22
RABGEF1Q9UJ41 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RABGEF1Q9UJ41 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RABGEF1Q9UJ41 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.43■□□□□ 0.22
RABGEF1Q9UJ41 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
RABGEF1Q9UJ41 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RABGEF1Q9UJ41 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RABGEF1Q9UJ41 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
RABGEF1Q9UJ41 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RABGEF1Q9UJ41 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RABGEF1Q9UJ41 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
RABGEF1Q9UJ41 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
RABGEF1Q9UJ41 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RABGEF1Q9UJ41 CICP13-201ENST00000422015 2789 ntBASIC16.43■□□□□ 0.22
RABGEF1Q9UJ41 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RABGEF1Q9UJ41 HAUS4P1-201ENST00000406739 1145 ntBASIC16.43■□□□□ 0.22
RABGEF1Q9UJ41 AL627223.1-201ENST00000416693 442 ntBASIC16.43■□□□□ 0.22
RABGEF1Q9UJ41 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.43■□□□□ 0.22
RABGEF1Q9UJ41 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
RABGEF1Q9UJ41 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.43■□□□□ 0.22
RABGEF1Q9UJ41 MIR3909-201ENST00000579518 119 ntBASIC16.43■□□□□ 0.22
RABGEF1Q9UJ41 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.43■□□□□ 0.22
RABGEF1Q9UJ41 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.43■□□□□ 0.22
RABGEF1Q9UJ41 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.43■□□□□ 0.22
RABGEF1Q9UJ41 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RABGEF1Q9UJ41 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.43■□□□□ 0.22
RABGEF1Q9UJ41 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.43■□□□□ 0.22
RABGEF1Q9UJ41 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RABGEF1Q9UJ41 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.43■□□□□ 0.22
RABGEF1Q9UJ41 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.43■□□□□ 0.22
RABGEF1Q9UJ41 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RABGEF1Q9UJ41 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.43■□□□□ 0.22
RABGEF1Q9UJ41 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
RABGEF1Q9UJ41 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RABGEF1Q9UJ41 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.42■□□□□ 0.22
RABGEF1Q9UJ41 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RABGEF1Q9UJ41 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.42■□□□□ 0.22
RABGEF1Q9UJ41 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RABGEF1Q9UJ41 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
RABGEF1Q9UJ41 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RABGEF1Q9UJ41 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.42■□□□□ 0.22
RABGEF1Q9UJ41 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RABGEF1Q9UJ41 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.42■□□□□ 0.22
RABGEF1Q9UJ41 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.42■□□□□ 0.22
RABGEF1Q9UJ41 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.42■□□□□ 0.22
RABGEF1Q9UJ41 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.42■□□□□ 0.22
RABGEF1Q9UJ41 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.42■□□□□ 0.22
RABGEF1Q9UJ41 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RABGEF1Q9UJ41 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
RABGEF1Q9UJ41 PMS2P4-201ENST00000412466 1052 ntBASIC16.42■□□□□ 0.22
RABGEF1Q9UJ41 FAM8A3P-201ENST00000427218 844 ntBASIC16.42■□□□□ 0.22
RABGEF1Q9UJ41 AC093724.1-201ENST00000448659 1027 ntBASIC16.42■□□□□ 0.22
RABGEF1Q9UJ41 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.42■□□□□ 0.22
RABGEF1Q9UJ41 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
RABGEF1Q9UJ41 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.42■□□□□ 0.22
RABGEF1Q9UJ41 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.42■□□□□ 0.22
RABGEF1Q9UJ41 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RABGEF1Q9UJ41 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.42■□□□□ 0.22
RABGEF1Q9UJ41 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.42■□□□□ 0.22
RABGEF1Q9UJ41 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.42■□□□□ 0.22
RABGEF1Q9UJ41 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.42■□□□□ 0.22
RABGEF1Q9UJ41 AC108359.1-201ENST00000616451 1211 ntBASIC16.42■□□□□ 0.22
RABGEF1Q9UJ41 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.42■□□□□ 0.22
RABGEF1Q9UJ41 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RABGEF1Q9UJ41 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RABGEF1Q9UJ41 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
RABGEF1Q9UJ41 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RABGEF1Q9UJ41 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RABGEF1Q9UJ41 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
RABGEF1Q9UJ41 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.42■□□□□ 0.22
RABGEF1Q9UJ41 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RABGEF1Q9UJ41 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.42■□□□□ 0.22
RABGEF1Q9UJ41 AL109954.1-202ENST00000564051 2148 ntBASIC16.42■□□□□ 0.22
RABGEF1Q9UJ41 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RABGEF1Q9UJ41 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.41■□□□□ 0.22
RABGEF1Q9UJ41 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.41■□□□□ 0.22
RABGEF1Q9UJ41 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RABGEF1Q9UJ41 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RABGEF1Q9UJ41 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.41■□□□□ 0.22
RABGEF1Q9UJ41 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RABGEF1Q9UJ41 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RABGEF1Q9UJ41 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RABGEF1Q9UJ41 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RABGEF1Q9UJ41 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.41■□□□□ 0.22
RABGEF1Q9UJ41 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RABGEF1Q9UJ41 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RABGEF1Q9UJ41 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.41■□□□□ 0.22
RABGEF1Q9UJ41 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RABGEF1Q9UJ41 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RABGEF1Q9UJ41 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RABGEF1Q9UJ41 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RABGEF1Q9UJ41 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RABGEF1Q9UJ41 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RABGEF1Q9UJ41 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC16.41■□□□□ 0.22
RABGEF1Q9UJ41 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RABGEF1Q9UJ41 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.41■□□□□ 0.22
RABGEF1Q9UJ41 SPDYE11-202ENST00000450699 704 ntBASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms