Protein–RNA interactions for Protein: Q9UBT3

DKK4, Dickkopf-related protein 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK4Q9UBT3 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
DKK4Q9UBT3 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC14.62□□□□□ -0.07
DKK4Q9UBT3 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC14.62□□□□□ -0.07
DKK4Q9UBT3 AL450472.2-201ENST00000603663 1156 ntBASIC14.62□□□□□ -0.07
DKK4Q9UBT3 ECM1P1-201ENST00000604092 1279 ntBASIC14.62□□□□□ -0.07
DKK4Q9UBT3 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
DKK4Q9UBT3 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.62□□□□□ -0.07
DKK4Q9UBT3 AP000346.4-201ENST00000614827 381 ntBASIC14.62□□□□□ -0.07
DKK4Q9UBT3 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC14.62□□□□□ -0.07
DKK4Q9UBT3 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
DKK4Q9UBT3 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
DKK4Q9UBT3 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
DKK4Q9UBT3 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
DKK4Q9UBT3 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
DKK4Q9UBT3 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
DKK4Q9UBT3 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
DKK4Q9UBT3 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
DKK4Q9UBT3 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
DKK4Q9UBT3 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
DKK4Q9UBT3 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
DKK4Q9UBT3 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
DKK4Q9UBT3 AL138799.1-201ENST00000448213 1675 ntBASIC14.61□□□□□ -0.07
DKK4Q9UBT3 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
DKK4Q9UBT3 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DKK4Q9UBT3 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.61□□□□□ -0.07
DKK4Q9UBT3 AL592424.1-201ENST00000563624 1536 ntBASIC14.61□□□□□ -0.07
DKK4Q9UBT3 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
DKK4Q9UBT3 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
DKK4Q9UBT3 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
DKK4Q9UBT3 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC14.61□□□□□ -0.07
DKK4Q9UBT3 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC14.61□□□□□ -0.07
DKK4Q9UBT3 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
DKK4Q9UBT3 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.61□□□□□ -0.07
DKK4Q9UBT3 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC14.61□□□□□ -0.07
DKK4Q9UBT3 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
DKK4Q9UBT3 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DKK4Q9UBT3 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
DKK4Q9UBT3 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.61□□□□□ -0.07
DKK4Q9UBT3 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DKK4Q9UBT3 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DKK4Q9UBT3 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
DKK4Q9UBT3 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.61□□□□□ -0.07
DKK4Q9UBT3 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DKK4Q9UBT3 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC14.61□□□□□ -0.07
DKK4Q9UBT3 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
DKK4Q9UBT3 AC114812.1-204ENST00000449669 728 ntBASIC14.61□□□□□ -0.07
DKK4Q9UBT3 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
DKK4Q9UBT3 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.61□□□□□ -0.07
DKK4Q9UBT3 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.61□□□□□ -0.07
DKK4Q9UBT3 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.61□□□□□ -0.07
DKK4Q9UBT3 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.61□□□□□ -0.07
DKK4Q9UBT3 AL023803.2-201ENST00000620080 638 ntBASIC14.61□□□□□ -0.07
DKK4Q9UBT3 COX6A1P2-201ENST00000620597 330 ntBASIC14.61□□□□□ -0.07
DKK4Q9UBT3 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC14.61□□□□□ -0.07
DKK4Q9UBT3 AC011491.1-203ENST00000637688 543 ntBASIC14.61□□□□□ -0.07
DKK4Q9UBT3 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
DKK4Q9UBT3 BCL2-203ENST00000589955 5011 ntBASIC14.61□□□□□ -0.07
DKK4Q9UBT3 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DKK4Q9UBT3 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
DKK4Q9UBT3 AP001282.1-201ENST00000531301 1499 ntBASIC14.61□□□□□ -0.07
DKK4Q9UBT3 AP001094.4-201ENST00000579008 2176 ntBASIC14.61□□□□□ -0.07
DKK4Q9UBT3 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DKK4Q9UBT3 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC14.61□□□□□ -0.07
DKK4Q9UBT3 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
DKK4Q9UBT3 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
DKK4Q9UBT3 GGT3P-204ENST00000453783 1664 ntBASIC14.61□□□□□ -0.07
DKK4Q9UBT3 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DKK4Q9UBT3 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DKK4Q9UBT3 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DKK4Q9UBT3 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DKK4Q9UBT3 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
DKK4Q9UBT3 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
DKK4Q9UBT3 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DKK4Q9UBT3 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
DKK4Q9UBT3 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC14.6□□□□□ -0.07
DKK4Q9UBT3 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
DKK4Q9UBT3 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DKK4Q9UBT3 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.6□□□□□ -0.07
DKK4Q9UBT3 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC14.6□□□□□ -0.07
DKK4Q9UBT3 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DKK4Q9UBT3 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DKK4Q9UBT3 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
DKK4Q9UBT3 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
DKK4Q9UBT3 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
DKK4Q9UBT3 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DKK4Q9UBT3 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
DKK4Q9UBT3 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
DKK4Q9UBT3 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.6□□□□□ -0.07
DKK4Q9UBT3 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.6□□□□□ -0.07
DKK4Q9UBT3 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14.6□□□□□ -0.07
DKK4Q9UBT3 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
DKK4Q9UBT3 AC005740.2-201ENST00000511085 419 ntBASIC14.6□□□□□ -0.07
DKK4Q9UBT3 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DKK4Q9UBT3 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.6□□□□□ -0.07
DKK4Q9UBT3 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
DKK4Q9UBT3 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.6□□□□□ -0.07
DKK4Q9UBT3 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
DKK4Q9UBT3 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC14.6□□□□□ -0.07
DKK4Q9UBT3 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DKK4Q9UBT3 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms