Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.53■□□□□ 0.24
DNMT3BQ9UBC3 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
DNMT3BQ9UBC3 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
DNMT3BQ9UBC3 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
DNMT3BQ9UBC3 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
DNMT3BQ9UBC3 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.53■□□□□ 0.24
DNMT3BQ9UBC3 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
DNMT3BQ9UBC3 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
DNMT3BQ9UBC3 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
DNMT3BQ9UBC3 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.53■□□□□ 0.24
DNMT3BQ9UBC3 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
DNMT3BQ9UBC3 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
DNMT3BQ9UBC3 SOCS2P1-201ENST00000417727 557 ntBASIC16.53■□□□□ 0.24
DNMT3BQ9UBC3 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.53■□□□□ 0.24
DNMT3BQ9UBC3 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
DNMT3BQ9UBC3 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC16.53■□□□□ 0.24
DNMT3BQ9UBC3 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.53■□□□□ 0.24
DNMT3BQ9UBC3 AP001889.1-201ENST00000525414 633 ntBASIC16.53■□□□□ 0.24
DNMT3BQ9UBC3 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.53■□□□□ 0.24
DNMT3BQ9UBC3 AL583810.1-201ENST00000553344 1045 ntBASIC16.53■□□□□ 0.24
DNMT3BQ9UBC3 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
DNMT3BQ9UBC3 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.53■□□□□ 0.24
DNMT3BQ9UBC3 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.53■□□□□ 0.24
DNMT3BQ9UBC3 MIR4538-201ENST00000581377 78 ntBASIC16.53■□□□□ 0.24
DNMT3BQ9UBC3 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.53■□□□□ 0.24
DNMT3BQ9UBC3 AL049840.4-201ENST00000602422 811 ntBASIC16.53■□□□□ 0.24
DNMT3BQ9UBC3 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
DNMT3BQ9UBC3 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.53■□□□□ 0.24
DNMT3BQ9UBC3 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
DNMT3BQ9UBC3 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
DNMT3BQ9UBC3 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
DNMT3BQ9UBC3 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
DNMT3BQ9UBC3 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.53■□□□□ 0.24
DNMT3BQ9UBC3 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
DNMT3BQ9UBC3 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
DNMT3BQ9UBC3 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.53■□□□□ 0.24
DNMT3BQ9UBC3 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
DNMT3BQ9UBC3 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
DNMT3BQ9UBC3 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.53■□□□□ 0.24
DNMT3BQ9UBC3 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.53■□□□□ 0.24
DNMT3BQ9UBC3 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
DNMT3BQ9UBC3 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.52■□□□□ 0.24
DNMT3BQ9UBC3 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
DNMT3BQ9UBC3 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.52■□□□□ 0.24
DNMT3BQ9UBC3 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
DNMT3BQ9UBC3 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
DNMT3BQ9UBC3 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
DNMT3BQ9UBC3 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
DNMT3BQ9UBC3 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
DNMT3BQ9UBC3 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.52■□□□□ 0.24
DNMT3BQ9UBC3 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
DNMT3BQ9UBC3 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
DNMT3BQ9UBC3 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
DNMT3BQ9UBC3 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
DNMT3BQ9UBC3 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
DNMT3BQ9UBC3 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
DNMT3BQ9UBC3 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
DNMT3BQ9UBC3 C1QBPP1-201ENST00000400117 770 ntBASIC16.52■□□□□ 0.24
DNMT3BQ9UBC3 AC099336.1-201ENST00000417053 1171 ntBASIC16.52■□□□□ 0.24
DNMT3BQ9UBC3 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16.52■□□□□ 0.24
DNMT3BQ9UBC3 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.52■□□□□ 0.24
DNMT3BQ9UBC3 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
DNMT3BQ9UBC3 VDAC1P7-201ENST00000462417 847 ntBASIC16.52■□□□□ 0.24
DNMT3BQ9UBC3 RPL13AP25-201ENST00000484130 612 ntBASIC16.52■□□□□ 0.24
DNMT3BQ9UBC3 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
DNMT3BQ9UBC3 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC16.52■□□□□ 0.24
DNMT3BQ9UBC3 AC068587.3-201ENST00000526613 355 ntBASIC16.52■□□□□ 0.24
DNMT3BQ9UBC3 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
DNMT3BQ9UBC3 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
DNMT3BQ9UBC3 PTP4A1P2-201ENST00000546033 454 ntBASIC16.52■□□□□ 0.24
DNMT3BQ9UBC3 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
DNMT3BQ9UBC3 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.52■□□□□ 0.24
DNMT3BQ9UBC3 AC120045.2-201ENST00000567334 178 ntBASIC16.52■□□□□ 0.24
DNMT3BQ9UBC3 CLUHP6-201ENST00000580789 941 ntBASIC16.52■□□□□ 0.24
DNMT3BQ9UBC3 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.52■□□□□ 0.24
DNMT3BQ9UBC3 AC097359.3-201ENST00000603982 1210 ntBASIC16.52■□□□□ 0.24
DNMT3BQ9UBC3 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
DNMT3BQ9UBC3 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
DNMT3BQ9UBC3 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
DNMT3BQ9UBC3 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
DNMT3BQ9UBC3 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.52■□□□□ 0.23
DNMT3BQ9UBC3 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
DNMT3BQ9UBC3 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
DNMT3BQ9UBC3 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.52■□□□□ 0.23
DNMT3BQ9UBC3 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.52■□□□□ 0.23
DNMT3BQ9UBC3 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
DNMT3BQ9UBC3 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
DNMT3BQ9UBC3 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
DNMT3BQ9UBC3 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.52■□□□□ 0.23
DNMT3BQ9UBC3 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.52■□□□□ 0.23
DNMT3BQ9UBC3 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
DNMT3BQ9UBC3 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.51■□□□□ 0.23
DNMT3BQ9UBC3 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.51■□□□□ 0.23
DNMT3BQ9UBC3 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
DNMT3BQ9UBC3 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
DNMT3BQ9UBC3 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
DNMT3BQ9UBC3 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
DNMT3BQ9UBC3 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
DNMT3BQ9UBC3 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.51■□□□□ 0.23
DNMT3BQ9UBC3 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms