Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HCFC1R1Q9NWW0 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
HCFC1R1Q9NWW0 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HCFC1R1Q9NWW0 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
HCFC1R1Q9NWW0 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
HCFC1R1Q9NWW0 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
HCFC1R1Q9NWW0 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HCFC1R1Q9NWW0 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HCFC1R1Q9NWW0 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HCFC1R1Q9NWW0 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.41■□□□□ 0.22
HCFC1R1Q9NWW0 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HCFC1R1Q9NWW0 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HCFC1R1Q9NWW0 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
HCFC1R1Q9NWW0 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.41■□□□□ 0.22
HCFC1R1Q9NWW0 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HCFC1R1Q9NWW0 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HCFC1R1Q9NWW0 AC026954.1-201ENST00000429771 1293 ntBASIC16.41■□□□□ 0.22
HCFC1R1Q9NWW0 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC16.41■□□□□ 0.22
HCFC1R1Q9NWW0 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.41■□□□□ 0.22
HCFC1R1Q9NWW0 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
HCFC1R1Q9NWW0 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.41■□□□□ 0.22
HCFC1R1Q9NWW0 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC16.41■□□□□ 0.22
HCFC1R1Q9NWW0 DRD5P1-201ENST00000456605 1438 ntBASIC16.41■□□□□ 0.22
HCFC1R1Q9NWW0 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HCFC1R1Q9NWW0 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.41■□□□□ 0.22
HCFC1R1Q9NWW0 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.41■□□□□ 0.22
HCFC1R1Q9NWW0 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HCFC1R1Q9NWW0 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HCFC1R1Q9NWW0 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.41■□□□□ 0.22
HCFC1R1Q9NWW0 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
HCFC1R1Q9NWW0 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.41■□□□□ 0.22
HCFC1R1Q9NWW0 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.4■□□□□ 0.22
HCFC1R1Q9NWW0 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCFC1R1Q9NWW0 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HCFC1R1Q9NWW0 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.4■□□□□ 0.22
HCFC1R1Q9NWW0 OR6D1P-203ENST00000641209 4860 ntBASIC16.4■□□□□ 0.22
HCFC1R1Q9NWW0 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCFC1R1Q9NWW0 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HCFC1R1Q9NWW0 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCFC1R1Q9NWW0 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HCFC1R1Q9NWW0 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.4■□□□□ 0.22
HCFC1R1Q9NWW0 AL662844.4-201ENST00000606367 2838 ntBASIC16.4■□□□□ 0.22
HCFC1R1Q9NWW0 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCFC1R1Q9NWW0 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HCFC1R1Q9NWW0 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HCFC1R1Q9NWW0 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCFC1R1Q9NWW0 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.4■□□□□ 0.22
HCFC1R1Q9NWW0 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCFC1R1Q9NWW0 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCFC1R1Q9NWW0 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC16.4■□□□□ 0.22
HCFC1R1Q9NWW0 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC16.4■□□□□ 0.22
HCFC1R1Q9NWW0 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.4■□□□□ 0.22
HCFC1R1Q9NWW0 AC016694.1-201ENST00000434179 700 ntBASIC16.4■□□□□ 0.22
HCFC1R1Q9NWW0 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.4■□□□□ 0.22
HCFC1R1Q9NWW0 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.4■□□□□ 0.22
HCFC1R1Q9NWW0 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
HCFC1R1Q9NWW0 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.4■□□□□ 0.22
HCFC1R1Q9NWW0 AC026410.3-201ENST00000514280 936 ntBASIC16.4■□□□□ 0.22
HCFC1R1Q9NWW0 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HCFC1R1Q9NWW0 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.4■□□□□ 0.22
HCFC1R1Q9NWW0 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.4■□□□□ 0.22
HCFC1R1Q9NWW0 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.4■□□□□ 0.22
HCFC1R1Q9NWW0 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.4■□□□□ 0.22
HCFC1R1Q9NWW0 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.4■□□□□ 0.22
HCFC1R1Q9NWW0 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HCFC1R1Q9NWW0 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC16.4■□□□□ 0.22
HCFC1R1Q9NWW0 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HCFC1R1Q9NWW0 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCFC1R1Q9NWW0 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCFC1R1Q9NWW0 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCFC1R1Q9NWW0 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.4■□□□□ 0.22
HCFC1R1Q9NWW0 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCFC1R1Q9NWW0 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC16.4■□□□□ 0.22
HCFC1R1Q9NWW0 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCFC1R1Q9NWW0 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
HCFC1R1Q9NWW0 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HCFC1R1Q9NWW0 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
HCFC1R1Q9NWW0 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
HCFC1R1Q9NWW0 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
HCFC1R1Q9NWW0 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HCFC1R1Q9NWW0 AD000864.1-201ENST00000624076 2295 ntBASIC16.39■□□□□ 0.21
HCFC1R1Q9NWW0 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
HCFC1R1Q9NWW0 AC018695.7-201ENST00000624587 2492 ntBASIC16.39■□□□□ 0.21
HCFC1R1Q9NWW0 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HCFC1R1Q9NWW0 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HCFC1R1Q9NWW0 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HCFC1R1Q9NWW0 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HCFC1R1Q9NWW0 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.39■□□□□ 0.21
HCFC1R1Q9NWW0 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HCFC1R1Q9NWW0 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HCFC1R1Q9NWW0 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HCFC1R1Q9NWW0 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HCFC1R1Q9NWW0 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.39■□□□□ 0.21
HCFC1R1Q9NWW0 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.39■□□□□ 0.21
HCFC1R1Q9NWW0 AC108725.1-201ENST00000495472 409 ntBASIC16.39■□□□□ 0.21
HCFC1R1Q9NWW0 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
HCFC1R1Q9NWW0 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC16.39■□□□□ 0.21
HCFC1R1Q9NWW0 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
HCFC1R1Q9NWW0 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC16.39■□□□□ 0.21
HCFC1R1Q9NWW0 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms