Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PARPBPQ9NWS1 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.35□□□□□ -0.11
PARPBPQ9NWS1 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PARPBPQ9NWS1 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PARPBPQ9NWS1 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.35□□□□□ -0.11
PARPBPQ9NWS1 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.35□□□□□ -0.11
PARPBPQ9NWS1 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PARPBPQ9NWS1 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.35□□□□□ -0.11
PARPBPQ9NWS1 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 AC008677.1-201ENST00000519230 1561 ntBASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 AL596087.1-201ENST00000400979 1969 ntBASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 KLF2P3-201ENST00000451977 1087 ntBASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 AC105021.1-202ENST00000570572 669 ntBASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.34□□□□□ -0.11
PARPBPQ9NWS1 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
PARPBPQ9NWS1 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
PARPBPQ9NWS1 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PARPBPQ9NWS1 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
PARPBPQ9NWS1 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
PARPBPQ9NWS1 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.33□□□□□ -0.11
PARPBPQ9NWS1 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
PARPBPQ9NWS1 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.33□□□□□ -0.12
PARPBPQ9NWS1 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PARPBPQ9NWS1 AC092364.2-201ENST00000596710 2692 ntBASIC14.33□□□□□ -0.12
PARPBPQ9NWS1 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.33□□□□□ -0.12
PARPBPQ9NWS1 AP001282.1-201ENST00000531301 1499 ntBASIC14.33□□□□□ -0.12
PARPBPQ9NWS1 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PARPBPQ9NWS1 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.33□□□□□ -0.12
PARPBPQ9NWS1 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
PARPBPQ9NWS1 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PARPBPQ9NWS1 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
PARPBPQ9NWS1 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.33□□□□□ -0.12
PARPBPQ9NWS1 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PARPBPQ9NWS1 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.33□□□□□ -0.12
PARPBPQ9NWS1 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PARPBPQ9NWS1 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.33□□□□□ -0.12
PARPBPQ9NWS1 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PARPBPQ9NWS1 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.33□□□□□ -0.12
PARPBPQ9NWS1 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PARPBPQ9NWS1 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.33□□□□□ -0.12
PARPBPQ9NWS1 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.33□□□□□ -0.12
PARPBPQ9NWS1 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.33□□□□□ -0.12
PARPBPQ9NWS1 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PARPBPQ9NWS1 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms