Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
VTA1Q9NP79 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.7■□□□□ 0.42
VTA1Q9NP79 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VTA1Q9NP79 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VTA1Q9NP79 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VTA1Q9NP79 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
VTA1Q9NP79 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VTA1Q9NP79 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.7■□□□□ 0.42
VTA1Q9NP79 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VTA1Q9NP79 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VTA1Q9NP79 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
VTA1Q9NP79 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
VTA1Q9NP79 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VTA1Q9NP79 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.69■□□□□ 0.42
VTA1Q9NP79 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VTA1Q9NP79 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
VTA1Q9NP79 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VTA1Q9NP79 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VTA1Q9NP79 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
VTA1Q9NP79 AC018892.3-201ENST00000623986 2499 ntBASIC17.69■□□□□ 0.42
VTA1Q9NP79 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.69■□□□□ 0.42
VTA1Q9NP79 AC016694.1-201ENST00000434179 700 ntBASIC17.69■□□□□ 0.42
VTA1Q9NP79 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC17.69■□□□□ 0.42
VTA1Q9NP79 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VTA1Q9NP79 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.69■□□□□ 0.42
VTA1Q9NP79 AC022137.2-201ENST00000503482 481 ntBASIC17.69■□□□□ 0.42
VTA1Q9NP79 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC17.69■□□□□ 0.42
VTA1Q9NP79 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC17.69■□□□□ 0.42
VTA1Q9NP79 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC17.69■□□□□ 0.42
VTA1Q9NP79 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VTA1Q9NP79 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.69■□□□□ 0.42
VTA1Q9NP79 AL139384.1-201ENST00000612143 3047 ntBASIC17.69■□□□□ 0.42
VTA1Q9NP79 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.69■□□□□ 0.42
VTA1Q9NP79 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
VTA1Q9NP79 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VTA1Q9NP79 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.69■□□□□ 0.42
VTA1Q9NP79 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VTA1Q9NP79 MSTO2P-201ENST00000314835 1709 ntBASIC17.69■□□□□ 0.42
VTA1Q9NP79 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VTA1Q9NP79 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VTA1Q9NP79 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
VTA1Q9NP79 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
VTA1Q9NP79 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
VTA1Q9NP79 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VTA1Q9NP79 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VTA1Q9NP79 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
VTA1Q9NP79 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
VTA1Q9NP79 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VTA1Q9NP79 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.68■□□□□ 0.42
VTA1Q9NP79 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
VTA1Q9NP79 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
VTA1Q9NP79 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
VTA1Q9NP79 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.68■□□□□ 0.42
VTA1Q9NP79 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VTA1Q9NP79 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VTA1Q9NP79 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
VTA1Q9NP79 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
VTA1Q9NP79 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.68■□□□□ 0.42
VTA1Q9NP79 FAM21FP-201ENST00000426241 1131 ntBASIC17.68■□□□□ 0.42
VTA1Q9NP79 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.68■□□□□ 0.42
VTA1Q9NP79 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
VTA1Q9NP79 AL355994.2-201ENST00000447882 704 ntBASIC17.68■□□□□ 0.42
VTA1Q9NP79 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
VTA1Q9NP79 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
VTA1Q9NP79 AC106760.1-201ENST00000508690 800 ntBASIC17.68■□□□□ 0.42
VTA1Q9NP79 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.68■□□□□ 0.42
VTA1Q9NP79 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
VTA1Q9NP79 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC17.68■□□□□ 0.42
VTA1Q9NP79 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
VTA1Q9NP79 AC079316.1-201ENST00000548397 411 ntBASIC17.68■□□□□ 0.42
VTA1Q9NP79 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
VTA1Q9NP79 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.68■□□□□ 0.42
VTA1Q9NP79 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.68■□□□□ 0.42
VTA1Q9NP79 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.68■□□□□ 0.42
VTA1Q9NP79 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.68■□□□□ 0.42
VTA1Q9NP79 AC015910.1-201ENST00000579400 975 ntBASIC17.68■□□□□ 0.42
VTA1Q9NP79 AC107373.2-201ENST00000607735 490 ntBASIC17.68■□□□□ 0.42
VTA1Q9NP79 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.68■□□□□ 0.42
VTA1Q9NP79 OR6D1P-203ENST00000641209 4860 ntBASIC17.68■□□□□ 0.42
VTA1Q9NP79 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VTA1Q9NP79 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VTA1Q9NP79 AC011270.2-201ENST00000624293 2550 ntBASIC17.68■□□□□ 0.42
VTA1Q9NP79 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VTA1Q9NP79 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.67■□□□□ 0.42
VTA1Q9NP79 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VTA1Q9NP79 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VTA1Q9NP79 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
VTA1Q9NP79 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
VTA1Q9NP79 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
VTA1Q9NP79 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.67■□□□□ 0.42
VTA1Q9NP79 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VTA1Q9NP79 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VTA1Q9NP79 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.67■□□□□ 0.42
VTA1Q9NP79 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.67■□□□□ 0.42
VTA1Q9NP79 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.67■□□□□ 0.42
VTA1Q9NP79 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VTA1Q9NP79 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VTA1Q9NP79 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
VTA1Q9NP79 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
VTA1Q9NP79 MPV17-206ENST00000402722 827 ntTSL 3 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms