Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AC243562.2-201ENST00000561247 970 ntBASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 RN7SL204P-201ENST00000582831 262 ntBASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 AC138761.1-201ENST00000584393 385 ntBASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 LINC02560-201ENST00000596379 459 ntBASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 AC008761.3-201ENST00000624803 892 ntBASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 CYP4F24P-201ENST00000586049 1580 ntBASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 AC103702.1-201ENST00000548801 2630 ntBASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 NORAD-201ENST00000565493 5339 ntBASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP3Q9BWW4 AL513477.1-201ENST00000602865 2407 ntBASIC13.34□□□□□ -0.27
SSBP3Q9BWW4 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC13.34□□□□□ -0.27
SSBP3Q9BWW4 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SSBP3Q9BWW4 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.34□□□□□ -0.27
SSBP3Q9BWW4 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP3Q9BWW4 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP3Q9BWW4 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP3Q9BWW4 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP3Q9BWW4 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.34□□□□□ -0.27
SSBP3Q9BWW4 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.34□□□□□ -0.27
SSBP3Q9BWW4 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
SSBP3Q9BWW4 AC068587.6-202ENST00000641839 5619 ntBASIC13.34□□□□□ -0.27
SSBP3Q9BWW4 PAUPAR-201ENST00000630360 2965 ntBASIC13.34□□□□□ -0.27
SSBP3Q9BWW4 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP3Q9BWW4 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP3Q9BWW4 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SSBP3Q9BWW4 CALY-203ENST00000368558 825 ntTSL 5 BASIC13.34□□□□□ -0.27
SSBP3Q9BWW4 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP3Q9BWW4 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP3Q9BWW4 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP3Q9BWW4 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.34□□□□□ -0.27
SSBP3Q9BWW4 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.34□□□□□ -0.27
SSBP3Q9BWW4 AC009477.1-201ENST00000452936 217 ntBASIC13.34□□□□□ -0.27
SSBP3Q9BWW4 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.34□□□□□ -0.27
SSBP3Q9BWW4 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP3Q9BWW4 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP3Q9BWW4 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP3Q9BWW4 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP3Q9BWW4 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC13.34□□□□□ -0.27
SSBP3Q9BWW4 AL844908.2-201ENST00000609461 460 ntBASIC13.34□□□□□ -0.27
SSBP3Q9BWW4 AL033527.5-202ENST00000641632 1098 ntBASIC13.34□□□□□ -0.27
SSBP3Q9BWW4 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP3Q9BWW4 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP3Q9BWW4 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP3Q9BWW4 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP3Q9BWW4 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.34□□□□□ -0.27
SSBP3Q9BWW4 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC13.34□□□□□ -0.27
SSBP3Q9BWW4 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP3Q9BWW4 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP3Q9BWW4 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP3Q9BWW4 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP3Q9BWW4 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP3Q9BWW4 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP3Q9BWW4 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP3Q9BWW4 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP3Q9BWW4 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP3Q9BWW4 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP3Q9BWW4 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP3Q9BWW4 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC13.34□□□□□ -0.27
SSBP3Q9BWW4 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC13.34□□□□□ -0.27
SSBP3Q9BWW4 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP3Q9BWW4 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.34□□□□□ -0.27
SSBP3Q9BWW4 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
SSBP3Q9BWW4 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
SSBP3Q9BWW4 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.34□□□□□ -0.27
SSBP3Q9BWW4 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.33□□□□□ -0.27
SSBP3Q9BWW4 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
SSBP3Q9BWW4 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SSBP3Q9BWW4 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
SSBP3Q9BWW4 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
SSBP3Q9BWW4 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SSBP3Q9BWW4 AL136982.4-201ENST00000437689 1740 ntBASIC13.33□□□□□ -0.27
SSBP3Q9BWW4 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
SSBP3Q9BWW4 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13.33□□□□□ -0.27
SSBP3Q9BWW4 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms