Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TUBA1CQ9BQE3 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TUBA1CQ9BQE3 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TUBA1CQ9BQE3 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TUBA1CQ9BQE3 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TUBA1CQ9BQE3 AC012569.1-201ENST00000591191 1524 ntBASIC15.12■□□□□ 0.01
TUBA1CQ9BQE3 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
TUBA1CQ9BQE3 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
TUBA1CQ9BQE3 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
TUBA1CQ9BQE3 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TUBA1CQ9BQE3 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.12■□□□□ 0.01
TUBA1CQ9BQE3 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
TUBA1CQ9BQE3 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
TUBA1CQ9BQE3 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TUBA1CQ9BQE3 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.12■□□□□ 0.01
TUBA1CQ9BQE3 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TUBA1CQ9BQE3 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TUBA1CQ9BQE3 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
TUBA1CQ9BQE3 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TUBA1CQ9BQE3 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.12■□□□□ 0.01
TUBA1CQ9BQE3 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TUBA1CQ9BQE3 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TUBA1CQ9BQE3 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TUBA1CQ9BQE3 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TUBA1CQ9BQE3 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.12■□□□□ 0.01
TUBA1CQ9BQE3 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.12■□□□□ 0.01
TUBA1CQ9BQE3 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TUBA1CQ9BQE3 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TUBA1CQ9BQE3 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TUBA1CQ9BQE3 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.12■□□□□ 0.01
TUBA1CQ9BQE3 HMGA1P7-201ENST00000406908 502 ntBASIC15.12■□□□□ 0.01
TUBA1CQ9BQE3 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.12■□□□□ 0.01
TUBA1CQ9BQE3 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.12■□□□□ 0.01
TUBA1CQ9BQE3 AC140658.5-201ENST00000438532 169 ntBASIC15.12■□□□□ 0.01
TUBA1CQ9BQE3 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.12■□□□□ 0.01
TUBA1CQ9BQE3 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.12■□□□□ 0.01
TUBA1CQ9BQE3 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
TUBA1CQ9BQE3 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.12■□□□□ 0.01
TUBA1CQ9BQE3 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TUBA1CQ9BQE3 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
TUBA1CQ9BQE3 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.12■□□□□ 0.01
TUBA1CQ9BQE3 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TUBA1CQ9BQE3 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TUBA1CQ9BQE3 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TUBA1CQ9BQE3 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.12■□□□□ 0.01
TUBA1CQ9BQE3 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TUBA1CQ9BQE3 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
TUBA1CQ9BQE3 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
TUBA1CQ9BQE3 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TUBA1CQ9BQE3 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.12■□□□□ 0.01
TUBA1CQ9BQE3 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TUBA1CQ9BQE3 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TUBA1CQ9BQE3 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TUBA1CQ9BQE3 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.12■□□□□ 0.01
TUBA1CQ9BQE3 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TUBA1CQ9BQE3 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.12■□□□□ 0.01
TUBA1CQ9BQE3 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TUBA1CQ9BQE3 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.11■□□□□ 0.01
TUBA1CQ9BQE3 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TUBA1CQ9BQE3 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TUBA1CQ9BQE3 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TUBA1CQ9BQE3 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.11■□□□□ 0.01
TUBA1CQ9BQE3 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TUBA1CQ9BQE3 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
TUBA1CQ9BQE3 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.11■□□□□ 0.01
TUBA1CQ9BQE3 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TUBA1CQ9BQE3 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.11■□□□□ 0.01
TUBA1CQ9BQE3 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TUBA1CQ9BQE3 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TUBA1CQ9BQE3 AC006277.1-201ENST00000624348 1610 ntBASIC15.11■□□□□ 0.01
TUBA1CQ9BQE3 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TUBA1CQ9BQE3 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TUBA1CQ9BQE3 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TUBA1CQ9BQE3 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TUBA1CQ9BQE3 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
TUBA1CQ9BQE3 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TUBA1CQ9BQE3 MIR648-201ENST00000385046 94 ntBASIC15.11■□□□□ 0.01
TUBA1CQ9BQE3 AC002056.1-201ENST00000395613 760 ntBASIC15.11■□□□□ 0.01
TUBA1CQ9BQE3 CNN2P11-201ENST00000429351 262 ntBASIC15.11■□□□□ 0.01
TUBA1CQ9BQE3 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.11■□□□□ 0.01
TUBA1CQ9BQE3 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.11■□□□□ 0.01
TUBA1CQ9BQE3 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
TUBA1CQ9BQE3 POU5F1P6-201ENST00000466990 990 ntBASIC15.11■□□□□ 0.01
TUBA1CQ9BQE3 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
TUBA1CQ9BQE3 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.11■□□□□ 0.01
TUBA1CQ9BQE3 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.11■□□□□ 0.01
TUBA1CQ9BQE3 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
TUBA1CQ9BQE3 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.11■□□□□ 0.01
TUBA1CQ9BQE3 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.11■□□□□ 0.01
TUBA1CQ9BQE3 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TUBA1CQ9BQE3 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TUBA1CQ9BQE3 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
TUBA1CQ9BQE3 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TUBA1CQ9BQE3 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.11■□□□□ 0.01
TUBA1CQ9BQE3 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TUBA1CQ9BQE3 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TUBA1CQ9BQE3 CICP23-201ENST00000605013 2741 ntBASIC15.11■□□□□ 0.01
TUBA1CQ9BQE3 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TUBA1CQ9BQE3 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.11■□□□□ 0.01
TUBA1CQ9BQE3 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms