Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE1Q99829 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE1Q99829 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE1Q99829 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
CPNE1Q99829 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CPNE1Q99829 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE1Q99829 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE1Q99829 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CPNE1Q99829 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE1Q99829 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE1Q99829 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE1Q99829 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE1Q99829 AL671277.1-201ENST00000429656 993 ntBASIC15.96■□□□□ 0.15
CPNE1Q99829 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.96■□□□□ 0.15
CPNE1Q99829 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE1Q99829 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.96■□□□□ 0.15
CPNE1Q99829 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE1Q99829 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.96■□□□□ 0.15
CPNE1Q99829 RNA5SP410-201ENST00000516285 106 ntBASIC15.96■□□□□ 0.15
CPNE1Q99829 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.96■□□□□ 0.15
CPNE1Q99829 FAM86C2P-203ENST00000528684 1004 ntBASIC15.96■□□□□ 0.15
CPNE1Q99829 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.96■□□□□ 0.15
CPNE1Q99829 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.96■□□□□ 0.15
CPNE1Q99829 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CPNE1Q99829 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.96■□□□□ 0.15
CPNE1Q99829 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.96■□□□□ 0.15
CPNE1Q99829 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE1Q99829 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.96■□□□□ 0.15
CPNE1Q99829 AC099063.4-201ENST00000641099 1602 ntBASIC15.96■□□□□ 0.15
CPNE1Q99829 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.96■□□□□ 0.15
CPNE1Q99829 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
CPNE1Q99829 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE1Q99829 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE1Q99829 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE1Q99829 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
CPNE1Q99829 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CPNE1Q99829 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.96■□□□□ 0.14
CPNE1Q99829 C18orf15-201ENST00000623680 2534 ntBASIC15.96■□□□□ 0.14
CPNE1Q99829 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CPNE1Q99829 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CPNE1Q99829 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CPNE1Q99829 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE1Q99829 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE1Q99829 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
CPNE1Q99829 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CPNE1Q99829 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE1Q99829 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE1Q99829 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE1Q99829 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.95■□□□□ 0.14
CPNE1Q99829 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.95■□□□□ 0.14
CPNE1Q99829 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE1Q99829 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE1Q99829 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.95■□□□□ 0.14
CPNE1Q99829 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE1Q99829 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.95■□□□□ 0.14
CPNE1Q99829 MED15P5-201ENST00000423150 992 ntBASIC15.95■□□□□ 0.14
CPNE1Q99829 KRT18P3-201ENST00000451602 1288 ntBASIC15.95■□□□□ 0.14
CPNE1Q99829 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.95■□□□□ 0.14
CPNE1Q99829 RN7SL589P-201ENST00000481268 310 ntBASIC15.95■□□□□ 0.14
CPNE1Q99829 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.95■□□□□ 0.14
CPNE1Q99829 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
CPNE1Q99829 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.95■□□□□ 0.14
CPNE1Q99829 AC027601.4-201ENST00000611259 610 ntBASIC15.95■□□□□ 0.14
CPNE1Q99829 AC091812.2-201ENST00000619081 385 ntBASIC15.95■□□□□ 0.14
CPNE1Q99829 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE1Q99829 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.95■□□□□ 0.14
CPNE1Q99829 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE1Q99829 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE1Q99829 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE1Q99829 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE1Q99829 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE1Q99829 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.95■□□□□ 0.14
CPNE1Q99829 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CPNE1Q99829 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE1Q99829 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE1Q99829 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CPNE1Q99829 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE1Q99829 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE1Q99829 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE1Q99829 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE1Q99829 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
CPNE1Q99829 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.94■□□□□ 0.14
CPNE1Q99829 AC009090.5-201ENST00000624886 2285 ntBASIC15.94■□□□□ 0.14
CPNE1Q99829 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE1Q99829 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CPNE1Q99829 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.94■□□□□ 0.14
CPNE1Q99829 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.94■□□□□ 0.14
CPNE1Q99829 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.94■□□□□ 0.14
CPNE1Q99829 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.94■□□□□ 0.14
CPNE1Q99829 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CPNE1Q99829 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE1Q99829 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
CPNE1Q99829 AC127383.1-201ENST00000444697 1800 ntBASIC15.94■□□□□ 0.14
CPNE1Q99829 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
CPNE1Q99829 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE1Q99829 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
CPNE1Q99829 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE1Q99829 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE1Q99829 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE1Q99829 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms