Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
LITAFQ99732 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
LITAFQ99732 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC10.62□□□□□ -0.71
LITAFQ99732 CLN6-214ENST00000636314 442 ntTSL 3 BASIC10.62□□□□□ -0.71
LITAFQ99732 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LITAFQ99732 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
LITAFQ99732 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
LITAFQ99732 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
LITAFQ99732 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LITAFQ99732 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC10.62□□□□□ -0.71
LITAFQ99732 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC10.62□□□□□ -0.71
LITAFQ99732 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
LITAFQ99732 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
LITAFQ99732 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
LITAFQ99732 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
LITAFQ99732 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
LITAFQ99732 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
LITAFQ99732 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
LITAFQ99732 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
LITAFQ99732 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LITAFQ99732 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
LITAFQ99732 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
LITAFQ99732 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC10.61□□□□□ -0.71
LITAFQ99732 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
LITAFQ99732 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
LITAFQ99732 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
LITAFQ99732 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LITAFQ99732 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LITAFQ99732 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC10.61□□□□□ -0.71
LITAFQ99732 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LITAFQ99732 MTHFR-210ENST00000641407 2387 ntBASIC10.61□□□□□ -0.71
LITAFQ99732 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC10.61□□□□□ -0.71
LITAFQ99732 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
LITAFQ99732 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LITAFQ99732 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LITAFQ99732 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC10.61□□□□□ -0.71
LITAFQ99732 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
LITAFQ99732 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LITAFQ99732 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
LITAFQ99732 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LITAFQ99732 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LITAFQ99732 CICP8-201ENST00000455800 2813 ntBASIC10.61□□□□□ -0.71
LITAFQ99732 AC113367.3-201ENST00000508316 1912 ntBASIC10.61□□□□□ -0.71
LITAFQ99732 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
LITAFQ99732 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
LITAFQ99732 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
LITAFQ99732 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC10.61□□□□□ -0.71
LITAFQ99732 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC10.61□□□□□ -0.71
LITAFQ99732 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
LITAFQ99732 LIN28AP1-201ENST00000429574 405 ntBASIC10.61□□□□□ -0.71
LITAFQ99732 BX664615.1-201ENST00000443558 458 ntBASIC10.61□□□□□ -0.71
LITAFQ99732 ATP5G1P1-201ENST00000448724 379 ntBASIC10.61□□□□□ -0.71
LITAFQ99732 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
LITAFQ99732 CDV3-207ENST00000508481 661 ntTSL 3 BASIC10.61□□□□□ -0.71
LITAFQ99732 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC10.61□□□□□ -0.71
LITAFQ99732 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC10.61□□□□□ -0.71
LITAFQ99732 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC10.61□□□□□ -0.71
LITAFQ99732 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC10.61□□□□□ -0.71
LITAFQ99732 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC10.61□□□□□ -0.71
LITAFQ99732 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC10.61□□□□□ -0.71
LITAFQ99732 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC10.61□□□□□ -0.71
LITAFQ99732 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC10.61□□□□□ -0.71
LITAFQ99732 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC10.61□□□□□ -0.71
LITAFQ99732 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LITAFQ99732 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LITAFQ99732 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC10.61□□□□□ -0.71
LITAFQ99732 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LITAFQ99732 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
LITAFQ99732 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
LITAFQ99732 INTS4P1-203ENST00000641008 3683 ntBASIC10.61□□□□□ -0.71
LITAFQ99732 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
LITAFQ99732 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LITAFQ99732 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
LITAFQ99732 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LITAFQ99732 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LITAFQ99732 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LITAFQ99732 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
LITAFQ99732 AC018892.3-201ENST00000623986 2499 ntBASIC10.61□□□□□ -0.71
LITAFQ99732 TCAF1P1-201ENST00000414990 2232 ntBASIC10.61□□□□□ -0.71
LITAFQ99732 AC089987.1-201ENST00000551654 2209 ntBASIC10.61□□□□□ -0.71
LITAFQ99732 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
LITAFQ99732 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LITAFQ99732 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
LITAFQ99732 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LITAFQ99732 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC10.61□□□□□ -0.71
LITAFQ99732 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC10.61□□□□□ -0.71
LITAFQ99732 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LITAFQ99732 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
LITAFQ99732 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LITAFQ99732 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC10.6□□□□□ -0.71
LITAFQ99732 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC10.6□□□□□ -0.71
LITAFQ99732 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LITAFQ99732 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC10.6□□□□□ -0.71
LITAFQ99732 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC10.6□□□□□ -0.71
LITAFQ99732 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LITAFQ99732 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
LITAFQ99732 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
LITAFQ99732 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LITAFQ99732 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC10.6□□□□□ -0.71
LITAFQ99732 AC152010.1-201ENST00000415779 2006 ntBASIC10.6□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms