Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NDNQ99608 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NDNQ99608 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
NDNQ99608 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NDNQ99608 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NDNQ99608 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NDNQ99608 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NDNQ99608 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NDNQ99608 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDNQ99608 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NDNQ99608 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.05■□□□□ 0.16
NDNQ99608 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
NDNQ99608 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDNQ99608 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NDNQ99608 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.05■□□□□ 0.16
NDNQ99608 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDNQ99608 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.05■□□□□ 0.16
NDNQ99608 AC073347.1-201ENST00000421633 2643 ntBASIC16.05■□□□□ 0.16
NDNQ99608 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
NDNQ99608 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.05■□□□□ 0.16
NDNQ99608 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDNQ99608 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDNQ99608 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC16.05■□□□□ 0.16
NDNQ99608 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDNQ99608 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
NDNQ99608 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDNQ99608 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDNQ99608 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.05■□□□□ 0.16
NDNQ99608 GPX1P2-201ENST00000429271 606 ntBASIC16.05■□□□□ 0.16
NDNQ99608 AC245100.5-201ENST00000452108 331 ntBASIC16.05■□□□□ 0.16
NDNQ99608 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
NDNQ99608 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.05■□□□□ 0.16
NDNQ99608 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.05■□□□□ 0.16
NDNQ99608 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.05■□□□□ 0.16
NDNQ99608 AC105233.2-201ENST00000523697 349 ntBASIC16.05■□□□□ 0.16
NDNQ99608 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.05■□□□□ 0.16
NDNQ99608 AF228730.5-201ENST00000530288 346 ntBASIC16.05■□□□□ 0.16
NDNQ99608 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.05■□□□□ 0.16
NDNQ99608 AC040169.1-201ENST00000565382 521 ntBASIC16.05■□□□□ 0.16
NDNQ99608 AC027307.2-201ENST00000591252 911 ntBASIC16.05■□□□□ 0.16
NDNQ99608 AC073389.1-201ENST00000595595 795 ntBASIC16.05■□□□□ 0.16
NDNQ99608 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
NDNQ99608 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NDNQ99608 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDNQ99608 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
NDNQ99608 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NDNQ99608 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDNQ99608 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.05■□□□□ 0.16
NDNQ99608 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDNQ99608 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDNQ99608 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDNQ99608 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
NDNQ99608 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
NDNQ99608 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDNQ99608 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDNQ99608 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
NDNQ99608 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.04■□□□□ 0.16
NDNQ99608 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.04■□□□□ 0.16
NDNQ99608 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NDNQ99608 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NDNQ99608 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDNQ99608 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
NDNQ99608 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
NDNQ99608 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDNQ99608 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDNQ99608 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.04■□□□□ 0.16
NDNQ99608 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDNQ99608 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDNQ99608 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NDNQ99608 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDNQ99608 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.04■□□□□ 0.16
NDNQ99608 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NDNQ99608 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.04■□□□□ 0.16
NDNQ99608 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDNQ99608 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
NDNQ99608 AKAP8P1-201ENST00000434743 1349 ntBASIC16.04■□□□□ 0.16
NDNQ99608 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.04■□□□□ 0.16
NDNQ99608 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDNQ99608 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDNQ99608 MIR574-201ENST00000385209 96 ntBASIC16.04■□□□□ 0.16
NDNQ99608 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.04■□□□□ 0.16
NDNQ99608 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.04■□□□□ 0.16
NDNQ99608 ADH5P3-201ENST00000433842 1137 ntBASIC16.04■□□□□ 0.16
NDNQ99608 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.04■□□□□ 0.16
NDNQ99608 PGAM5P1-201ENST00000518923 814 ntBASIC16.04■□□□□ 0.16
NDNQ99608 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.04■□□□□ 0.16
NDNQ99608 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.04■□□□□ 0.16
NDNQ99608 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDNQ99608 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
NDNQ99608 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
NDNQ99608 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDNQ99608 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDNQ99608 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.04■□□□□ 0.16
NDNQ99608 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDNQ99608 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.04■□□□□ 0.16
NDNQ99608 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NDNQ99608 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDNQ99608 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.04■□□□□ 0.16
NDNQ99608 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
NDNQ99608 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms