Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDK5RAP2Q96SN8 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDK5RAP2Q96SN8 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDK5RAP2Q96SN8 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.41■□□□□ 0.54
CDK5RAP2Q96SN8 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDK5RAP2Q96SN8 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDK5RAP2Q96SN8 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDK5RAP2Q96SN8 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDK5RAP2Q96SN8 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDK5RAP2Q96SN8 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.41■□□□□ 0.54
CDK5RAP2Q96SN8 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDK5RAP2Q96SN8 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDK5RAP2Q96SN8 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDK5RAP2Q96SN8 REXO1L6P-201ENST00000603433 1515 ntBASIC18.41■□□□□ 0.54
CDK5RAP2Q96SN8 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDK5RAP2Q96SN8 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC18.41■□□□□ 0.54
CDK5RAP2Q96SN8 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC18.41■□□□□ 0.54
CDK5RAP2Q96SN8 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC18.41■□□□□ 0.54
CDK5RAP2Q96SN8 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CDK5RAP2Q96SN8 FAM21FP-201ENST00000426241 1131 ntBASIC18.41■□□□□ 0.54
CDK5RAP2Q96SN8 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDK5RAP2Q96SN8 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC18.41■□□□□ 0.54
CDK5RAP2Q96SN8 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC18.41■□□□□ 0.54
CDK5RAP2Q96SN8 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDK5RAP2Q96SN8 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC18.41■□□□□ 0.54
CDK5RAP2Q96SN8 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.41■□□□□ 0.54
CDK5RAP2Q96SN8 AC020763.4-201ENST00000623414 4170 ntBASIC18.41■□□□□ 0.54
CDK5RAP2Q96SN8 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDK5RAP2Q96SN8 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC18.41■□□□□ 0.54
CDK5RAP2Q96SN8 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.41■□□□□ 0.54
CDK5RAP2Q96SN8 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.41■□□□□ 0.54
CDK5RAP2Q96SN8 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
CDK5RAP2Q96SN8 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDK5RAP2Q96SN8 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDK5RAP2Q96SN8 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC18.41■□□□□ 0.54
CDK5RAP2Q96SN8 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC18.4■□□□□ 0.54
CDK5RAP2Q96SN8 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDK5RAP2Q96SN8 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDK5RAP2Q96SN8 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDK5RAP2Q96SN8 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CDK5RAP2Q96SN8 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDK5RAP2Q96SN8 AMT-224ENST00000635808 1610 ntTSL 5 BASIC18.4■□□□□ 0.54
CDK5RAP2Q96SN8 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.4■□□□□ 0.54
CDK5RAP2Q96SN8 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDK5RAP2Q96SN8 KLF2P4-201ENST00000451959 1225 ntBASIC18.4■□□□□ 0.54
CDK5RAP2Q96SN8 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC18.4■□□□□ 0.54
CDK5RAP2Q96SN8 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC18.4■□□□□ 0.54
CDK5RAP2Q96SN8 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC18.4■□□□□ 0.54
CDK5RAP2Q96SN8 AC148477.4-201ENST00000613430 1793 ntBASIC18.4■□□□□ 0.54
CDK5RAP2Q96SN8 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC18.4■□□□□ 0.54
CDK5RAP2Q96SN8 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDK5RAP2Q96SN8 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC18.4■□□□□ 0.54
CDK5RAP2Q96SN8 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDK5RAP2Q96SN8 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDK5RAP2Q96SN8 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC18.4■□□□□ 0.54
CDK5RAP2Q96SN8 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC18.4■□□□□ 0.54
CDK5RAP2Q96SN8 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDK5RAP2Q96SN8 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CDK5RAP2Q96SN8 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDK5RAP2Q96SN8 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CDK5RAP2Q96SN8 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC18.39■□□□□ 0.54
CDK5RAP2Q96SN8 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.54
CDK5RAP2Q96SN8 AC026954.1-201ENST00000429771 1293 ntBASIC18.39■□□□□ 0.54
CDK5RAP2Q96SN8 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
CDK5RAP2Q96SN8 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC18.39■□□□□ 0.54
CDK5RAP2Q96SN8 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC18.39■□□□□ 0.54
CDK5RAP2Q96SN8 AP000812.2-201ENST00000538934 718 ntBASIC18.39■□□□□ 0.54
CDK5RAP2Q96SN8 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC18.39■□□□□ 0.54
CDK5RAP2Q96SN8 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC18.39■□□□□ 0.54
CDK5RAP2Q96SN8 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDK5RAP2Q96SN8 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDK5RAP2Q96SN8 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDK5RAP2Q96SN8 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDK5RAP2Q96SN8 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDK5RAP2Q96SN8 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDK5RAP2Q96SN8 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDK5RAP2Q96SN8 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDK5RAP2Q96SN8 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDK5RAP2Q96SN8 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDK5RAP2Q96SN8 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDK5RAP2Q96SN8 STX1A-203ENST00000395155 783 ntTSL 2 BASIC18.39■□□□□ 0.53
CDK5RAP2Q96SN8 POM121L8P-201ENST00000417732 1281 ntBASIC18.39■□□□□ 0.53
CDK5RAP2Q96SN8 POM121L9P-203ENST00000441984 1285 ntBASIC18.39■□□□□ 0.53
CDK5RAP2Q96SN8 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC18.39■□□□□ 0.53
CDK5RAP2Q96SN8 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
CDK5RAP2Q96SN8 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
CDK5RAP2Q96SN8 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDK5RAP2Q96SN8 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC18.39■□□□□ 0.53
CDK5RAP2Q96SN8 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDK5RAP2Q96SN8 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDK5RAP2Q96SN8 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
CDK5RAP2Q96SN8 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDK5RAP2Q96SN8 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDK5RAP2Q96SN8 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDK5RAP2Q96SN8 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CDK5RAP2Q96SN8 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC18.39■□□□□ 0.53
CDK5RAP2Q96SN8 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC18.39■□□□□ 0.53
CDK5RAP2Q96SN8 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDK5RAP2Q96SN8 AC127383.1-201ENST00000444697 1800 ntBASIC18.39■□□□□ 0.53
CDK5RAP2Q96SN8 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms