Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CRAMP1Q96RY5 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC19.23■□□□□ 0.67
CRAMP1Q96RY5 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
CRAMP1Q96RY5 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CRAMP1Q96RY5 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CRAMP1Q96RY5 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC19.23■□□□□ 0.67
CRAMP1Q96RY5 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CRAMP1Q96RY5 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CRAMP1Q96RY5 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CRAMP1Q96RY5 HOMER2P2-201ENST00000451621 847 ntBASIC19.23■□□□□ 0.67
CRAMP1Q96RY5 ARTN-209ENST00000479128 471 ntTSL 3 BASIC19.23■□□□□ 0.67
CRAMP1Q96RY5 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC19.23■□□□□ 0.67
CRAMP1Q96RY5 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC19.23■□□□□ 0.67
CRAMP1Q96RY5 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC19.23■□□□□ 0.67
CRAMP1Q96RY5 RHOQP1-201ENST00000555758 579 ntBASIC19.23■□□□□ 0.67
CRAMP1Q96RY5 MIR4313-201ENST00000580760 101 ntBASIC19.23■□□□□ 0.67
CRAMP1Q96RY5 TBCB-211ENST00000589996 724 ntTSL 3 BASIC19.23■□□□□ 0.67
CRAMP1Q96RY5 UBL5-208ENST00000593087 320 ntTSL 3 BASIC19.23■□□□□ 0.67
CRAMP1Q96RY5 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC19.23■□□□□ 0.67
CRAMP1Q96RY5 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC19.23■□□□□ 0.67
CRAMP1Q96RY5 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC19.23■□□□□ 0.67
CRAMP1Q96RY5 AC005695.3-201ENST00000614522 232 ntBASIC19.23■□□□□ 0.67
CRAMP1Q96RY5 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CRAMP1Q96RY5 PPA1-206ENST00000625364 644 ntTSL 5 BASIC19.23■□□□□ 0.67
CRAMP1Q96RY5 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC19.23■□□□□ 0.67
CRAMP1Q96RY5 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC19.23■□□□□ 0.67
CRAMP1Q96RY5 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CRAMP1Q96RY5 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CRAMP1Q96RY5 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.23■□□□□ 0.67
CRAMP1Q96RY5 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CRAMP1Q96RY5 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CRAMP1Q96RY5 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC19.23■□□□□ 0.67
CRAMP1Q96RY5 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CRAMP1Q96RY5 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CRAMP1Q96RY5 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CRAMP1Q96RY5 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CRAMP1Q96RY5 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CRAMP1Q96RY5 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CRAMP1Q96RY5 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CRAMP1Q96RY5 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CRAMP1Q96RY5 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CRAMP1Q96RY5 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CRAMP1Q96RY5 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CRAMP1Q96RY5 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CRAMP1Q96RY5 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CRAMP1Q96RY5 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CRAMP1Q96RY5 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CRAMP1Q96RY5 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.22■□□□□ 0.67
CRAMP1Q96RY5 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CRAMP1Q96RY5 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CRAMP1Q96RY5 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC19.22■□□□□ 0.67
CRAMP1Q96RY5 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CRAMP1Q96RY5 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CRAMP1Q96RY5 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CRAMP1Q96RY5 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CRAMP1Q96RY5 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CRAMP1Q96RY5 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CRAMP1Q96RY5 ACTBP8-201ENST00000403258 1108 ntBASIC19.22■□□□□ 0.67
CRAMP1Q96RY5 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CRAMP1Q96RY5 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC19.22■□□□□ 0.67
CRAMP1Q96RY5 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC19.22■□□□□ 0.67
CRAMP1Q96RY5 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CRAMP1Q96RY5 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC19.22■□□□□ 0.67
CRAMP1Q96RY5 AC004898.1-201ENST00000451057 766 ntBASIC19.22■□□□□ 0.67
CRAMP1Q96RY5 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC19.22■□□□□ 0.67
CRAMP1Q96RY5 RPSAP36-202ENST00000494591 1261 ntBASIC19.22■□□□□ 0.67
CRAMP1Q96RY5 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC19.22■□□□□ 0.67
CRAMP1Q96RY5 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC19.22■□□□□ 0.67
CRAMP1Q96RY5 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC19.22■□□□□ 0.67
CRAMP1Q96RY5 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CRAMP1Q96RY5 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19.22■□□□□ 0.67
CRAMP1Q96RY5 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.22■□□□□ 0.67
CRAMP1Q96RY5 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
CRAMP1Q96RY5 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CRAMP1Q96RY5 FOS-202ENST00000535987 1402 ntTSL 2 BASIC19.22■□□□□ 0.67
CRAMP1Q96RY5 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CRAMP1Q96RY5 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC19.22■□□□□ 0.67
CRAMP1Q96RY5 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CRAMP1Q96RY5 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CRAMP1Q96RY5 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC19.21■□□□□ 0.67
CRAMP1Q96RY5 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.21■□□□□ 0.67
CRAMP1Q96RY5 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CRAMP1Q96RY5 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC19.21■□□□□ 0.67
CRAMP1Q96RY5 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.21■□□□□ 0.67
CRAMP1Q96RY5 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CRAMP1Q96RY5 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CRAMP1Q96RY5 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
CRAMP1Q96RY5 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CRAMP1Q96RY5 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CRAMP1Q96RY5 AL590640.2-201ENST00000457038 527 ntBASIC19.21■□□□□ 0.67
CRAMP1Q96RY5 AKR7A2P1-201ENST00000460134 915 ntBASIC19.21■□□□□ 0.67
CRAMP1Q96RY5 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CRAMP1Q96RY5 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CRAMP1Q96RY5 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CRAMP1Q96RY5 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC19.21■□□□□ 0.67
CRAMP1Q96RY5 AP006547.1-201ENST00000563435 692 ntBASIC19.21■□□□□ 0.67
CRAMP1Q96RY5 EEF1DP1-201ENST00000585891 896 ntBASIC19.21■□□□□ 0.67
CRAMP1Q96RY5 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CRAMP1Q96RY5 AC244452.3-201ENST00000636814 210 ntBASIC19.21■□□□□ 0.67
CRAMP1Q96RY5 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms