Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
BBS4Q96RK4 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
BBS4Q96RK4 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.18■□□□□ 0.02
BBS4Q96RK4 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
BBS4Q96RK4 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
BBS4Q96RK4 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
BBS4Q96RK4 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
BBS4Q96RK4 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
BBS4Q96RK4 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
BBS4Q96RK4 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
BBS4Q96RK4 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
BBS4Q96RK4 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
BBS4Q96RK4 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
BBS4Q96RK4 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
BBS4Q96RK4 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
BBS4Q96RK4 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.17■□□□□ 0.02
BBS4Q96RK4 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
BBS4Q96RK4 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
BBS4Q96RK4 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
BBS4Q96RK4 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.17■□□□□ 0.02
BBS4Q96RK4 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
BBS4Q96RK4 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.17■□□□□ 0.02
BBS4Q96RK4 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
BBS4Q96RK4 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.17■□□□□ 0.02
BBS4Q96RK4 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
BBS4Q96RK4 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.17■□□□□ 0.02
BBS4Q96RK4 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
BBS4Q96RK4 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
BBS4Q96RK4 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.17■□□□□ 0.02
BBS4Q96RK4 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
BBS4Q96RK4 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
BBS4Q96RK4 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
BBS4Q96RK4 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
BBS4Q96RK4 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
BBS4Q96RK4 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
BBS4Q96RK4 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
BBS4Q96RK4 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
BBS4Q96RK4 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
BBS4Q96RK4 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.17■□□□□ 0.02
BBS4Q96RK4 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
BBS4Q96RK4 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
BBS4Q96RK4 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
BBS4Q96RK4 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
BBS4Q96RK4 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
BBS4Q96RK4 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.17■□□□□ 0.02
BBS4Q96RK4 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
BBS4Q96RK4 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
BBS4Q96RK4 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.17■□□□□ 0.02
BBS4Q96RK4 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.17■□□□□ 0.02
BBS4Q96RK4 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.17■□□□□ 0.02
BBS4Q96RK4 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.17■□□□□ 0.02
BBS4Q96RK4 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.17■□□□□ 0.02
BBS4Q96RK4 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.17■□□□□ 0.02
BBS4Q96RK4 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
BBS4Q96RK4 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.17■□□□□ 0.02
BBS4Q96RK4 AC055717.3-201ENST00000622967 595 ntBASIC15.17■□□□□ 0.02
BBS4Q96RK4 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
BBS4Q96RK4 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
BBS4Q96RK4 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
BBS4Q96RK4 HYMAI-201ENST00000635591 3347 ntBASIC15.17■□□□□ 0.02
BBS4Q96RK4 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
BBS4Q96RK4 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.17■□□□□ 0.02
BBS4Q96RK4 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
BBS4Q96RK4 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
BBS4Q96RK4 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.17■□□□□ 0.02
BBS4Q96RK4 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
BBS4Q96RK4 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.17■□□□□ 0.02
BBS4Q96RK4 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
BBS4Q96RK4 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.17■□□□□ 0.02
BBS4Q96RK4 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
BBS4Q96RK4 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
BBS4Q96RK4 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.17■□□□□ 0.02
BBS4Q96RK4 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.17■□□□□ 0.02
BBS4Q96RK4 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.17■□□□□ 0.02
BBS4Q96RK4 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.17■□□□□ 0.02
BBS4Q96RK4 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.17■□□□□ 0.02
BBS4Q96RK4 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
BBS4Q96RK4 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
BBS4Q96RK4 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BBS4Q96RK4 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.16■□□□□ 0.02
BBS4Q96RK4 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BBS4Q96RK4 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BBS4Q96RK4 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BBS4Q96RK4 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BBS4Q96RK4 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BBS4Q96RK4 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
BBS4Q96RK4 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BBS4Q96RK4 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.16■□□□□ 0.02
BBS4Q96RK4 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.16■□□□□ 0.02
BBS4Q96RK4 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
BBS4Q96RK4 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BBS4Q96RK4 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BBS4Q96RK4 AP3S2-216ENST00000617003 1561 ntBASIC15.16■□□□□ 0.02
BBS4Q96RK4 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.16■□□□□ 0.02
BBS4Q96RK4 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BBS4Q96RK4 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.16■□□□□ 0.02
BBS4Q96RK4 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
BBS4Q96RK4 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BBS4Q96RK4 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
BBS4Q96RK4 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms