Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC46A1Q96NT5 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC46A1Q96NT5 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SLC46A1Q96NT5 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.2■□□□□ 0.02
SLC46A1Q96NT5 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.2■□□□□ 0.02
SLC46A1Q96NT5 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC46A1Q96NT5 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.2■□□□□ 0.02
SLC46A1Q96NT5 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC46A1Q96NT5 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.2■□□□□ 0.02
SLC46A1Q96NT5 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC46A1Q96NT5 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SLC46A1Q96NT5 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC46A1Q96NT5 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
SLC46A1Q96NT5 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC46A1Q96NT5 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC46A1Q96NT5 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC46A1Q96NT5 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC46A1Q96NT5 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.19■□□□□ 0.02
SLC46A1Q96NT5 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC46A1Q96NT5 REXO1L8P-201ENST00000604378 1897 ntBASIC15.19■□□□□ 0.02
SLC46A1Q96NT5 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.19■□□□□ 0.02
SLC46A1Q96NT5 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC46A1Q96NT5 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC46A1Q96NT5 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC46A1Q96NT5 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC46A1Q96NT5 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC46A1Q96NT5 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.19■□□□□ 0.02
SLC46A1Q96NT5 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.19■□□□□ 0.02
SLC46A1Q96NT5 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC46A1Q96NT5 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.19■□□□□ 0.02
SLC46A1Q96NT5 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.19■□□□□ 0.02
SLC46A1Q96NT5 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC15.19■□□□□ 0.02
SLC46A1Q96NT5 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.19■□□□□ 0.02
SLC46A1Q96NT5 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC15.19■□□□□ 0.02
SLC46A1Q96NT5 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.19■□□□□ 0.02
SLC46A1Q96NT5 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC15.19■□□□□ 0.02
SLC46A1Q96NT5 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.19■□□□□ 0.02
SLC46A1Q96NT5 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.19■□□□□ 0.02
SLC46A1Q96NT5 GPR182-203ENST00000622922 591 ntBASIC15.19■□□□□ 0.02
SLC46A1Q96NT5 CU634019.7-201ENST00000624153 1185 ntBASIC15.19■□□□□ 0.02
SLC46A1Q96NT5 FP236241.2-201ENST00000624906 1185 ntBASIC15.19■□□□□ 0.02
SLC46A1Q96NT5 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC46A1Q96NT5 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
SLC46A1Q96NT5 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC46A1Q96NT5 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC46A1Q96NT5 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.19■□□□□ 0.02
SLC46A1Q96NT5 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC46A1Q96NT5 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC46A1Q96NT5 KRT8P44-201ENST00000441609 1350 ntBASIC15.19■□□□□ 0.02
SLC46A1Q96NT5 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC46A1Q96NT5 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
SLC46A1Q96NT5 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.19■□□□□ 0.02
SLC46A1Q96NT5 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC46A1Q96NT5 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
SLC46A1Q96NT5 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.19■□□□□ 0.02
SLC46A1Q96NT5 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC46A1Q96NT5 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC46A1Q96NT5 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.18■□□□□ 0.02
SLC46A1Q96NT5 TUBB1P2-201ENST00000422712 1306 ntBASIC15.18■□□□□ 0.02
SLC46A1Q96NT5 TUBB1P1-201ENST00000503144 1300 ntBASIC15.18■□□□□ 0.02
SLC46A1Q96NT5 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC46A1Q96NT5 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC46A1Q96NT5 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
SLC46A1Q96NT5 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC46A1Q96NT5 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC46A1Q96NT5 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC46A1Q96NT5 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.18■□□□□ 0.02
SLC46A1Q96NT5 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC46A1Q96NT5 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC46A1Q96NT5 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC46A1Q96NT5 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC46A1Q96NT5 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC46A1Q96NT5 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC46A1Q96NT5 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.18■□□□□ 0.02
SLC46A1Q96NT5 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC46A1Q96NT5 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC46A1Q96NT5 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC46A1Q96NT5 RNA5SP412-201ENST00000516234 123 ntBASIC15.18■□□□□ 0.02
SLC46A1Q96NT5 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SLC46A1Q96NT5 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SLC46A1Q96NT5 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC15.18■□□□□ 0.02
SLC46A1Q96NT5 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.18■□□□□ 0.02
SLC46A1Q96NT5 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SLC46A1Q96NT5 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC46A1Q96NT5 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
SLC46A1Q96NT5 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC46A1Q96NT5 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SLC46A1Q96NT5 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.18■□□□□ 0.02
SLC46A1Q96NT5 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.18■□□□□ 0.02
SLC46A1Q96NT5 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC46A1Q96NT5 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC46A1Q96NT5 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SLC46A1Q96NT5 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC46A1Q96NT5 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.18■□□□□ 0.02
SLC46A1Q96NT5 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SLC46A1Q96NT5 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.18■□□□□ 0.02
SLC46A1Q96NT5 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.18■□□□□ 0.02
SLC46A1Q96NT5 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
SLC46A1Q96NT5 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC46A1Q96NT5 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms