Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF48Q96MX3 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF48Q96MX3 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
ZNF48Q96MX3 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC12.99□□□□□ -0.33
ZNF48Q96MX3 AL512384.1-201ENST00000406683 331 ntBASIC12.99□□□□□ -0.33
ZNF48Q96MX3 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC12.99□□□□□ -0.33
ZNF48Q96MX3 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC12.99□□□□□ -0.33
ZNF48Q96MX3 FTH1-202ENST00000526640 786 ntTSL 2 BASIC12.99□□□□□ -0.33
ZNF48Q96MX3 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF48Q96MX3 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC12.99□□□□□ -0.33
ZNF48Q96MX3 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF48Q96MX3 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF48Q96MX3 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF48Q96MX3 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC12.99□□□□□ -0.33
ZNF48Q96MX3 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF48Q96MX3 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF48Q96MX3 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
ZNF48Q96MX3 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC12.99□□□□□ -0.33
ZNF48Q96MX3 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC12.99□□□□□ -0.33
ZNF48Q96MX3 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
ZNF48Q96MX3 AL136982.4-201ENST00000437689 1740 ntBASIC12.99□□□□□ -0.33
ZNF48Q96MX3 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF48Q96MX3 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF48Q96MX3 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF48Q96MX3 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF48Q96MX3 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 U82695.1-201ENST00000635752 1889 ntBASIC12.98□□□□□ -0.33
ZNF48Q96MX3 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 GPR53P-205ENST00000457298 1084 ntBASIC12.98□□□□□ -0.33
ZNF48Q96MX3 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 IGHV3-71-201ENST00000523324 359 ntBASIC12.98□□□□□ -0.33
ZNF48Q96MX3 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
ZNF48Q96MX3 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF48Q96MX3 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC12.97□□□□□ -0.33
ZNF48Q96MX3 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC12.97□□□□□ -0.33
ZNF48Q96MX3 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC12.97□□□□□ -0.33
ZNF48Q96MX3 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
ZNF48Q96MX3 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
ZNF48Q96MX3 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF48Q96MX3 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF48Q96MX3 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF48Q96MX3 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF48Q96MX3 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms