Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.52■□□□□ 0.56
CHAMP1Q96JM3 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
CHAMP1Q96JM3 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.52■□□□□ 0.56
CHAMP1Q96JM3 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHAMP1Q96JM3 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
CHAMP1Q96JM3 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CHAMP1Q96JM3 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHAMP1Q96JM3 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHAMP1Q96JM3 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CHAMP1Q96JM3 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
CHAMP1Q96JM3 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.52■□□□□ 0.55
CHAMP1Q96JM3 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CHAMP1Q96JM3 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CHAMP1Q96JM3 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CHAMP1Q96JM3 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC18.52■□□□□ 0.55
CHAMP1Q96JM3 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CHAMP1Q96JM3 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC18.52■□□□□ 0.55
CHAMP1Q96JM3 STK33-217ENST00000534493 1895 ntTSL 2 BASIC18.52■□□□□ 0.55
CHAMP1Q96JM3 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CHAMP1Q96JM3 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CHAMP1Q96JM3 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CHAMP1Q96JM3 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CHAMP1Q96JM3 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.55
CHAMP1Q96JM3 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CHAMP1Q96JM3 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CHAMP1Q96JM3 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CHAMP1Q96JM3 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHAMP1Q96JM3 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CHAMP1Q96JM3 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.51■□□□□ 0.55
CHAMP1Q96JM3 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHAMP1Q96JM3 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC18.51■□□□□ 0.55
CHAMP1Q96JM3 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHAMP1Q96JM3 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHAMP1Q96JM3 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC18.51■□□□□ 0.55
CHAMP1Q96JM3 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHAMP1Q96JM3 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CHAMP1Q96JM3 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC18.51■□□□□ 0.55
CHAMP1Q96JM3 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHAMP1Q96JM3 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHAMP1Q96JM3 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC18.51■□□□□ 0.55
CHAMP1Q96JM3 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
CHAMP1Q96JM3 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.51■□□□□ 0.55
CHAMP1Q96JM3 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.51■□□□□ 0.55
CHAMP1Q96JM3 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.51■□□□□ 0.55
CHAMP1Q96JM3 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.51■□□□□ 0.55
CHAMP1Q96JM3 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
CHAMP1Q96JM3 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.51■□□□□ 0.55
CHAMP1Q96JM3 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.51■□□□□ 0.55
CHAMP1Q96JM3 AL773604.1-201ENST00000617417 272 ntBASIC18.51■□□□□ 0.55
CHAMP1Q96JM3 AC004877.2-201ENST00000623941 599 ntBASIC18.51■□□□□ 0.55
CHAMP1Q96JM3 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHAMP1Q96JM3 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHAMP1Q96JM3 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC18.51■□□□□ 0.55
CHAMP1Q96JM3 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHAMP1Q96JM3 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHAMP1Q96JM3 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHAMP1Q96JM3 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC18.51■□□□□ 0.55
CHAMP1Q96JM3 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHAMP1Q96JM3 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHAMP1Q96JM3 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHAMP1Q96JM3 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CHAMP1Q96JM3 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHAMP1Q96JM3 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHAMP1Q96JM3 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC18.51■□□□□ 0.55
CHAMP1Q96JM3 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHAMP1Q96JM3 FLII-221ENST00000578558 2377 ntTSL 5 BASIC18.5■□□□□ 0.55
CHAMP1Q96JM3 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHAMP1Q96JM3 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHAMP1Q96JM3 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC18.5■□□□□ 0.55
CHAMP1Q96JM3 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC18.5■□□□□ 0.55
CHAMP1Q96JM3 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHAMP1Q96JM3 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CHAMP1Q96JM3 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC18.5■□□□□ 0.55
CHAMP1Q96JM3 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHAMP1Q96JM3 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC18.5■□□□□ 0.55
CHAMP1Q96JM3 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHAMP1Q96JM3 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHAMP1Q96JM3 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHAMP1Q96JM3 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.5■□□□□ 0.55
CHAMP1Q96JM3 AC140658.5-201ENST00000438532 169 ntBASIC18.5■□□□□ 0.55
CHAMP1Q96JM3 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CHAMP1Q96JM3 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.5■□□□□ 0.55
CHAMP1Q96JM3 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHAMP1Q96JM3 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.5■□□□□ 0.55
CHAMP1Q96JM3 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.5■□□□□ 0.55
CHAMP1Q96JM3 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHAMP1Q96JM3 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHAMP1Q96JM3 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.5■□□□□ 0.55
CHAMP1Q96JM3 AC127383.1-201ENST00000444697 1800 ntBASIC18.5■□□□□ 0.55
CHAMP1Q96JM3 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHAMP1Q96JM3 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHAMP1Q96JM3 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CHAMP1Q96JM3 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CHAMP1Q96JM3 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC18.5■□□□□ 0.55
CHAMP1Q96JM3 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.5■□□□□ 0.55
CHAMP1Q96JM3 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CHAMP1Q96JM3 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC18.5■□□□□ 0.55
CHAMP1Q96JM3 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHAMP1Q96JM3 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CHAMP1Q96JM3 UCKL1-AS1-201ENST00000623569 3602 ntBASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms